D. rerio Gene: si:ch211-250e5.2 - ENSDARG00000061496 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000061496
Namesi:ch211-250e5.2
Descriptionsi:ch211-250e5.2 [Source:ZFIN;Acc:ZDB-GENE-030131-8384]
OrganismDanio rerio (zebrafish)
Synonym(s)fb10f11, wu:fb10f11
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
5.90e3
  • 5.90e3
  • 6.18e3
80.23
  • 80.23
  • 79.30
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
7.94e3
  • 7.94e3
73.42
  • 73.42
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
8.42e3
  • 8.42e3
71.81
  • 71.81
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.10e4
  • 1.10e4
  • 1.91e4
63.16
  • 63.16
  • 35.99
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
1.19e4
  • 1.19e4
  • 1.20e4
  • 1.27e4
  • 1.28e4
  • 1.47e4
60.23
  • 60.23
  • 59.98
  • 57.32
  • 57.13
  • 50.87
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.23e4
  • 1.23e4
  • 1.24e4
58.80
  • 58.80
  • 58.36
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
1.32e4
  • 1.32e4
55.64
  • 55.64
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.49e4
  • 1.49e4
50.13
  • 50.13
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.50e4
  • 1.50e4
49.89
  • 49.89
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.59e4
  • 1.59e4
46.74
  • 46.74
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.77e4
  • 1.77e4
40.85
  • 40.85
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
1.90e4
  • 1.90e4
36.43
  • 36.43
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
2.01e4
  • 2.01e4
32.79
  • 32.79
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.37e4
  • 2.37e4
20.57
  • 20.57
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Vertebrata1 geneCompare expression

Paralogy information comes from OMA : ENSDARG00000061496.

Cross-references

EnsemblENSDARG00000061496 (si:ch211-250e5.2)
ZFINZDB-GENE-030131-8384 (si:ch211-250e5.2)
EMBLBX649337
Uniprot/SPTREMBLF1QP20, F1QP20_DANRE

Do not show this banner again