D. rerio Gene: tgfbrap1 - ENSDARG00000061508 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000061508
Nametgfbrap1
Descriptiontransforming growth factor, beta receptor associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-070410-66]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:162302
Orthologs(s)18 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
3.35e3
  • 3.35e3
88.77
  • 88.77
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
3.73e3
  • 3.73e3
  • 3.92e3
87.52
  • 87.52
  • 86.87
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
5.28e3
  • 5.28e3
82.32
  • 82.32
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
5.36e3
  • 5.36e3
82.05
  • 82.05
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
6.14e3
  • 6.14e3
79.45
  • 79.45
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
6.49e3
  • 6.49e3
  • 9.60e3
78.27
  • 78.27
  • 67.87
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
7.24e3
  • 7.24e3
75.76
  • 75.76
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
7.75e3
  • 7.75e3
74.07
  • 74.07
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
8.13e3
  • 8.13e3
  • 1.10e4
  • 1.15e4
  • 1.26e4
  • 1.61e4
72.78
  • 72.78
  • 63.17
  • 61.59
  • 57.97
  • 46.20
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
8.58e3
  • 8.58e3
71.26
  • 71.26
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
9.30e3
  • 9.30e3
68.85
  • 68.85
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
9.95e3
  • 9.95e3
66.69
  • 66.69
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.07e4
  • 1.07e4
64.30
  • 64.30
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.10e4
  • 1.10e4
63.20
  • 63.20
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
1.12e4
  • 1.12e4
62.46
  • 62.46
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.20e4
  • 1.20e4
  • 1.69e4
59.85
  • 59.85
  • 43.37
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.22e4
  • 1.22e4
59.04
  • 59.04
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.26e4
  • 1.26e4
57.73
  • 57.73
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.28e4
  • 1.28e4
57.15
  • 57.15
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.29e4
  • 1.29e4
  • 1.55e4
56.83
  • 56.83
  • 47.94
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.33e4
  • 1.33e4
  • 1.36e4
55.45
  • 55.45
  • 54.44
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.36e4
  • 1.36e4
54.30
  • 54.30
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.37e4
  • 1.37e4
54.17
  • 54.17
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.38e4
  • 1.38e4
53.67
  • 53.67
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.40e4
  • 1.40e4
53.19
  • 53.19
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.46e4
  • 1.46e4
51.01
  • 51.01
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Eumetazoa1 geneCompare expression
Eukaryota2 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000061508.

Cross-references

EnsemblENSDARG00000061508 (tgfbrap1)
ZFINZDB-GENE-070410-66 (tgfbrap1)
EMBLCR936426
Uniprot/SPTREMBLF1QP13, F1QP13_DANRE

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