D. rerio Gene: nxt2 - ENSDARG00000061527 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000061527
Namenxt2
Descriptionnuclear transport factor 2-like export factor 2 [Source:ZFIN;Acc:ZDB-GENE-050521-1]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:153074
Orthologs(s)31 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
1.23e3
  • 1.23e3
  • 2.92e3
95.89
  • 95.89
  • 90.23
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.38e3
  • 1.38e3
95.39
  • 95.39
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.76e3
  • 1.76e3
94.10
  • 94.10
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
2.20e3
  • 2.20e3
92.65
  • 92.65
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
2.71e3
  • 2.71e3
90.91
  • 90.91
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
2.98e3
  • 2.98e3
90.01
  • 90.01
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
3.07e3
  • 3.07e3
89.73
  • 89.73
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
3.16e3
  • 3.16e3
  • 3.16e3
  • 3.99e3
  • 4.98e3
  • 5.20e3
89.41
  • 89.41
  • 89.41
  • 86.65
  • 83.32
  • 82.58
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
3.35e3
  • 3.35e3
  • 5.41e3
88.79
  • 88.79
  • 81.89
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
3.35e3
  • 3.35e3
88.78
  • 88.78
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
3.43e3
  • 3.43e3
  • 4.43e3
88.53
  • 88.53
  • 85.18
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
3.87e3
  • 3.87e3
  • 8.36e3
87.04
  • 87.04
  • 72.01
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
4.48e3
  • 4.48e3
  • 5.76e3
85.01
  • 85.01
  • 80.71
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
4.53e3
  • 4.53e3
84.83
  • 84.83
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
4.95e3
  • 4.95e3
83.42
  • 83.42
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
4.98e3
  • 4.98e3
83.33
  • 83.33
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
5.11e3
  • 5.11e3
82.91
  • 82.91
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
5.36e3
  • 5.36e3
82.06
  • 82.06
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000032Pharyngula:High-pec
5.97e3
  • 5.97e3
80.00
  • 80.00
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
6.18e3
  • 6.18e3
79.32
  • 79.32
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
6.27e3
  • 6.27e3
79.00
  • 79.00
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
6.39e3
  • 6.39e3
78.60
  • 78.60
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
6.49e3
  • 6.49e3
78.28
  • 78.28
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
6.62e3
  • 6.62e3
77.83
  • 77.83
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
7.45e3
  • 7.45e3
75.06
  • 75.06
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
8.56e3
  • 8.56e3
71.35
  • 71.35
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
8.84e3
  • 8.84e3
70.41
  • 70.41
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi19 species21 genesCompare expression
Bilateria26 species31 genesCompare expression

Orthology information comes from OMA : ENSDARG00000061527.

Cross-references

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