D. rerio Gene: unc5db - ENSDARG00000061541 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000061541
Nameunc5db
Descriptionunc-5 netrin receptor Db [Source:ZFIN;Acc:ZDB-GENE-060531-162]
OrganismDanio rerio (zebrafish)
Synonym(s)si:dkeyp-38h2.6
Orthologs(s)25 orthologs
Paralog(s)3 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000468multi-cellular organism
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000027Segmentation:20-25 somites
  • UBERON:0000068embryo stage
6.64e3
  • 6.64e3
  • 6.97e3
  • 1.50e4
77.77
  • 77.77
  • 76.66
  • 49.80
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
7.05e3
  • 7.05e3
  • 7.86e3
76.39
  • 76.39
  • 73.68
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
8.97e3
  • 8.97e3
69.96
  • 69.96
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
9.54e3
  • 9.54e3
68.07
  • 68.07
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
9.92e3
  • 9.92e3
66.77
  • 66.77
AEIR
  • AEIR
UBERON:0001893telencephalon
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
1.16e4
  • 1.16e4
  • 1.31e4
  • 1.42e4
61.09
  • 61.09
  • 56.22
  • 52.60
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
1.19e4
  • 1.19e4
  • 1.22e4
  • 1.34e4
  • 1.34e4
60.21
  • 60.21
  • 59.08
  • 54.99
  • 54.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.28e4
  • 1.28e4
57.12
  • 57.12
AEIR
  • AEIR
UBERON:0002028hindbrain
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
1.30e4
  • 1.30e4
  • 1.34e4
56.49
  • 56.49
  • 54.97
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.33e4
  • 1.33e4
55.47
  • 55.47
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
1.35e4
  • 1.35e4
54.91
  • 54.91
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.49e4
  • 1.49e4
50.23
  • 50.23
AEIR
  • AEIR
UBERON:0001897dorsal plus ventral thalamus
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
1.49e4
  • 1.49e4
  • 1.49e4
50.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.51e4
  • 1.51e4
  • 1.80e4
49.56
  • 49.56
  • 39.69
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
1.55e4
  • 1.55e4
  • 1.91e4
  • 1.97e4
  • 2.07e4
  • 2.09e4
48.16
  • 48.16
  • 36.05
  • 33.99
  • 30.61
  • 29.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.59e4
  • 1.59e4
46.82
  • 46.82
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.88e4
  • 1.88e4
37.15
  • 37.15
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.99e4
  • 1.99e4
  • 2.18e4
33.46
  • 33.46
  • 27.13
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.04e4
  • 2.04e4
31.58
  • 31.58
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
2.10e4
  • 2.10e4
29.84
  • 29.84
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.10e4
  • 2.10e4
29.81
  • 29.81
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.13e4
  • 2.13e4
28.59
  • 28.59
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • EST data: UniGene
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi18 species18 genesCompare expression
Bilateria25 species25 genesCompare expression

Orthology information comes from OMA : ENSDARG00000061541.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Deuterostomia3 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000061541.

Cross-references

EnsemblENSDARG00000061541 (unc5db)
ZFINZDB-GENE-060531-162 (unc5db)
EMBLBX323062
Uniprot/SPTREMBLA3KPR8, A3KPR8_DANRE

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