D. rerio Gene: ctdspl2a - ENSDARG00000061587 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000061587
Namectdspl2a
DescriptionCTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2a [Source:ZFIN;Acc:ZDB-GENE-061013-647]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:154017

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
786
  • 786
  • 812
  • 2.52e3
  • 4.48e3
  • 5.49e3
97.37
  • 97.37
  • 97.29
  • 91.56
  • 85.02
  • 81.62
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.22e3
  • 1.22e3
95.93
  • 95.93
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
1.46e3
  • 1.46e3
  • 2.97e3
  • 3.89e3
  • 7.56e3
95.11
  • 95.11
  • 90.05
  • 86.99
  • 74.69
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000109gastrula stage
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
2.12e3
  • 2.12e3
  • 3.50e3
  • 3.90e3
  • 5.28e3
  • 5.35e3
  • 6.06e3
92.91
  • 92.91
  • 88.30
  • 86.94
  • 82.31
  • 82.07
  • 79.73
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
2.71e3
  • 2.71e3
  • 3.37e3
  • 3.66e3
  • 4.05e3
  • 4.59e3
  • 5.16e3
  • 5.23e3
  • 5.31e3
  • 5.75e3
  • 5.77e3
90.94
  • 90.94
  • 88.71
  • 87.73
  • 86.45
  • 84.65
  • 82.73
  • 82.50
  • 82.24
  • 80.75
  • 80.68
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000037Larval:Day 5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000036Larval:Day 4
  • ZFS:0000042Juvenile:Days 30-44
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
3.05e3
  • 3.05e3
  • 4.36e3
  • 5.36e3
  • 5.87e3
  • 5.94e3
  • 5.96e3
  • 6.05e3
  • 6.20e3
  • 6.31e3
  • 6.38e3
  • 6.69e3
  • 6.69e3
  • 7.02e3
  • 7.29e3
  • 1.47e4
  • 1.50e4
  • 1.50e4
89.79
  • 89.79
  • 85.41
  • 82.06
  • 80.35
  • 80.10
  • 80.05
  • 79.74
  • 79.23
  • 78.88
  • 78.63
  • 77.61
  • 77.59
  • 76.49
  • 75.59
  • 50.68
  • 49.92
  • 49.80
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
3.29e3
  • 3.29e3
88.99
  • 88.99
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
3.44e3
  • 3.44e3
88.50
  • 88.50
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
3.49e3
  • 3.49e3
  • 5.71e3
88.33
  • 88.33
  • 80.90
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
4.05e3
  • 4.05e3
86.44
  • 86.44
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
4.10e3
  • 4.10e3
86.26
  • 86.26
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
4.49e3
  • 4.49e3
  • 5.45e3
  • 6.57e3
84.97
  • 84.97
  • 81.75
  • 78.02
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
4.57e3
  • 4.57e3
  • 6.20e3
84.70
  • 84.70
  • 79.26
AEIR
  • AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
4.59e3
  • 4.59e3
84.62
  • 84.62
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
4.64e3
  • 4.64e3
84.47
  • 84.47
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
4.71e3
  • 4.71e3
  • 5.52e3
84.23
  • 84.23
  • 81.52
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
4.76e3
  • 4.76e3
84.06
  • 84.06
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
4.84e3
  • 4.84e3
83.80
  • 83.80
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
4.84e3
  • 4.84e3
83.78
  • 83.78
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
4.97e3
  • 4.97e3
83.37
  • 83.37
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
4.99e3
  • 4.99e3
83.29
  • 83.29
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
5.27e3
  • 5.27e3
82.36
  • 82.36
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
5.97e3
  • 5.97e3
80.01
  • 80.01
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
6.05e3
  • 6.05e3
79.76
  • 79.76
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
6.24e3
  • 6.24e3
79.10
  • 79.10
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
6.27e3
  • 6.27e3
79.00
  • 79.00
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
6.40e3
  • 6.40e3
78.57
  • 78.57
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
6.44e3
  • 6.44e3
78.44
  • 78.44
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
6.96e3
  • 6.96e3
76.68
  • 76.68
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
7.24e3
  • 7.24e3
75.75
  • 75.75
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
7.26e3
  • 7.26e3
75.68
  • 75.68
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

EnsemblENSDARG00000061587 (ctdspl2a)
ZFINZDB-GENE-061013-647 (ctdspl2a)
EMBLBC124794, BX005048
Uniprot/SPTREMBLE9QJD7, E9QJD7_DANRE
Uniprot/SWISSPROTCTL2A_DANRE, Q08BB5

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