D. rerio Gene: si:ch73-334d15.1 - ENSDARG00000061672 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000061672
Namesi:ch73-334d15.1
Descriptionsi:ch73-334d15.1 [Source:ZFIN;Acc:ZDB-GENE-091118-35]
OrganismDanio rerio (zebrafish)
Paralog(s)26 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0000066fully formed stage
3.07e3
  • 3.07e3
89.72
  • 89.72
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
5.19e3
  • 5.19e3
82.61
  • 82.61
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
5.48e3
  • 5.48e3
81.64
  • 81.64
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
6.26e3
  • 6.26e3
  • 7.69e3
79.03
  • 79.03
  • 74.25
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
9.30e3
  • 9.30e3
68.86
  • 68.86
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
9.79e3
  • 9.79e3
67.23
  • 67.23
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.03e4
  • 1.03e4
65.48
  • 65.48
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.06e4
  • 1.06e4
64.40
  • 64.40
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
1.13e4
  • 1.13e4
  • 1.14e4
  • 1.29e4
62.00
  • 62.00
  • 61.92
  • 56.85
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000036Larval:Day 4
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
  • UBERON:0000106zygote stage
  • ZFS:0000037Larval:Day 5
1.14e4
  • 1.14e4
  • 1.28e4
  • 1.30e4
  • 1.35e4
  • 1.41e4
  • 1.48e4
  • 1.49e4
  • 1.50e4
  • 1.53e4
  • 1.61e4
61.68
  • 61.68
  • 57.07
  • 56.48
  • 54.91
  • 52.66
  • 50.51
  • 50.11
  • 49.81
  • 48.72
  • 46.23
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.15e4
  • 1.15e4
61.46
  • 61.46
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
1.21e4
  • 1.21e4
  • 1.22e4
59.46
  • 59.46
  • 59.29
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
1.25e4
  • 1.25e4
  • 1.35e4
  • 1.36e4
  • 1.37e4
  • 1.40e4
  • 1.42e4
  • 1.60e4
58.28
  • 58.28
  • 54.68
  • 54.52
  • 54.19
  • 53.10
  • 52.39
  • 46.55
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
1.31e4
  • 1.31e4
  • 1.90e4
56.27
  • 56.27
  • 36.27
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.34e4
  • 1.34e4
55.18
  • 55.18
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.37e4
  • 1.37e4
54.11
  • 54.11
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.48e4
  • 1.48e4
  • 1.88e4
50.60
  • 50.60
  • 37.20
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.48e4
  • 1.48e4
50.38
  • 50.38
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.54e4
  • 1.54e4
48.42
  • 48.42
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.62e4
  • 1.62e4
45.61
  • 45.61
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Vertebrata7 genesCompare expression
Chordata14 genesCompare expression
Deuterostomia25 genesCompare expression
Eumetazoa26 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000061672.

Cross-references

EnsemblENSDARG00000061672 (si:ch73-334d15.1)
ZFINZDB-GENE-091118-35 (si:ch73-334d15.1)
EMBLCU694373
Uniprot/SPTREMBLE7F408, E7F408_DANRE

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