D. rerio Gene: arvcfb - ENSDARG00000061688 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000061688
Namearvcfb
Descriptionarmadillo repeat gene deleted in velocardiofacial syndrome b [Source:ZFIN;Acc:ZDB-GENE-060526-60]
OrganismDanio rerio (zebrafish)
Synonym(s)si:ch211-173n20.1, wu:fc11a08
Orthologs(s)15 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
598
  • 598
  • 947
  • 4.36e3
  • 5.58e3
98.00
  • 98.00
  • 96.83
  • 85.40
  • 81.33
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
713
  • 713
  • 862
97.62
  • 97.62
  • 97.12
AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
1.33e3
  • 1.33e3
95.55
  • 95.55
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
2.00e3
  • 2.00e3
  • 2.02e3
  • 2.59e3
  • 2.63e3
  • 3.78e3
  • 4.95e3
  • 9.89e3
  • 1.25e4
  • 1.40e4
  • 1.42e4
93.30
  • 93.30
  • 93.26
  • 91.33
  • 91.21
  • 87.36
  • 83.43
  • 66.88
  • 58.31
  • 53.16
  • 52.59
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
2.26e3
  • 2.26e3
  • 9.90e3
92.44
  • 92.44
  • 66.86
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
2.43e3
  • 2.43e3
91.86
  • 91.86
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
3.25e3
  • 3.25e3
89.13
  • 89.13
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
3.63e3
  • 3.63e3
87.84
  • 87.84
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
3.93e3
  • 3.93e3
  • 5.85e3
  • 6.58e3
86.85
  • 86.85
  • 80.43
  • 77.96
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
4.70e3
  • 4.70e3
84.28
  • 84.28
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000036Larval:Day 4
  • ZFS:0000040Larval:Days 14-20
  • UBERON:0000106zygote stage
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
6.63e3
  • 6.63e3
  • 8.78e3
  • 8.84e3
  • 9.19e3
  • 9.91e3
  • 1.04e4
  • 1.13e4
  • 1.22e4
  • 1.32e4
  • 1.38e4
  • 1.40e4
  • 1.44e4
  • 1.44e4
77.79
  • 77.79
  • 70.59
  • 70.41
  • 69.23
  • 66.83
  • 65.10
  • 62.21
  • 59.21
  • 55.69
  • 53.81
  • 53.11
  • 51.85
  • 51.79
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
6.73e3
  • 6.73e3
77.47
  • 77.47
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
6.96e3
  • 6.96e3
76.70
  • 76.70
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
7.02e3
  • 7.02e3
76.50
  • 76.50
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
7.29e3
  • 7.29e3
  • 8.34e3
  • 1.15e4
  • 1.16e4
  • 1.27e4
75.59
  • 75.59
  • 72.08
  • 61.61
  • 61.27
  • 57.45
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
8.06e3
  • 8.06e3
73.02
  • 73.02
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
8.24e3
  • 8.24e3
72.40
  • 72.40
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
8.37e3
  • 8.37e3
  • 1.13e4
71.99
  • 71.99
  • 62.10
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
8.60e3
  • 8.60e3
71.21
  • 71.21
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
9.29e3
  • 9.29e3
68.88
  • 68.88
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
9.34e3
  • 9.34e3
68.72
  • 68.72
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.03e4
  • 1.03e4
65.56
  • 65.56
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.03e4
  • 1.03e4
65.43
  • 65.43
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.07e4
  • 1.07e4
64.16
  • 64.16
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.12e4
  • 1.12e4
62.49
  • 62.49
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000109gastrula stage
  • ZFS:0000021Gastrula:90%-epiboly
1.13e4
  • 1.13e4
  • 1.20e4
  • 1.34e4
  • 1.59e4
62.13
  • 62.13
  • 59.88
  • 55.21
  • 46.86
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.13e4
  • 1.13e4
62.03
  • 62.03
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.16e4
  • 1.16e4
61.16
  • 61.16
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.27e4
  • 1.27e4
57.40
  • 57.40
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.33e4
  • 1.33e4
55.49
  • 55.49
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.39e4
  • 1.39e4
53.44
  • 53.44
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.52e4
  • 1.52e4
48.97
  • 48.97
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression

Paralogy information comes from OMA : ENSDARG00000061688.

Cross-references

Do not show this banner again