D. rerio Gene: hnrnpm - ENSDARG00000061735 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000061735
Namehnrnpm
Descriptionheterogeneous nuclear ribonucleoprotein M [Source:ZFIN;Acc:ZDB-GENE-030131-6898]
OrganismDanio rerio (zebrafish)
Synonym(s)si:ch211-197g15.1, wu:fa10g07, wu:fa98b02
Orthologs(s)18 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
284
  • 284
  • 671
  • 782
  • 4.11e3
  • 4.75e3
99.05
  • 99.05
  • 97.76
  • 97.39
  • 86.25
  • 84.10
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
285
  • 285
  • 441
  • 458
  • 473
  • 509
  • 539
  • 574
  • 656
  • 669
  • 1.22e3
99.05
  • 99.05
  • 98.53
  • 98.47
  • 98.42
  • 98.30
  • 98.20
  • 98.08
  • 97.81
  • 97.76
  • 95.91
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000109gastrula stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
296
  • 296
  • 343
  • 357
  • 425
  • 430
  • 442
99.01
  • 99.01
  • 98.86
  • 98.81
  • 98.58
  • 98.56
  • 98.52
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
331
  • 331
98.90
  • 98.90
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
374
  • 374
98.75
  • 98.75
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
376
  • 376
  • 462
  • 1.76e3
  • 3.29e3
98.75
  • 98.75
  • 98.46
  • 94.12
  • 88.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
407
  • 407
98.64
  • 98.64
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
444
  • 444
98.52
  • 98.52
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
449
  • 449
98.50
  • 98.50
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
541
  • 541
  • 1.47e3
98.19
  • 98.19
  • 95.07
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
572
  • 572
98.09
  • 98.09
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000106zygote stage
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000037Larval:Day 5
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000023Segmentation:1-4 somites
  • UBERON:0004707pharyngula stage
  • UBERON:00072322 cell stage
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • ZFS:0000006Cleavage:32-cell
  • ZFS:0000007Cleavage:64-cell
  • ZFS:0000008Blastula:128-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000010Blastula:512-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000012Blastula:High
  • ZFS:0000013Blastula:Oblong
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000028Segmentation:26+ somites
  • UBERON:0000104life cycle
  • ZFS:0000049segmentation
  • UBERON:0000068embryo stage
613
  • 613
  • 628
  • 656
  • 693
  • 821
  • 1.33e3
  • 1.36e3
  • 1.38e3
  • 1.47e3
  • 1.55e3
  • 2.41e3
  • 2.41e3
  • 2.54e3
  • 3.18e3
  • 6.54e3
  • 6.64e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.97e3
  • 7.03e3
  • 7.47e3
  • 7.47e3
  • 7.91e3
  • 8.96e3
  • 8.96e3
  • 9.25e3
  • 1.38e4
  • 1.45e4
  • 1.49e4
97.95
  • 97.95
  • 97.90
  • 97.81
  • 97.68
  • 97.25
  • 95.56
  • 95.46
  • 95.37
  • 95.08
  • 94.82
  • 91.95
  • 91.94
  • 91.51
  • 89.36
  • 78.12
  • 77.77
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 76.66
  • 76.46
  • 74.99
  • 74.99
  • 73.52
  • 69.99
  • 69.99
  • 69.04
  • 53.85
  • 51.51
  • 50.20
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
622
  • 622
97.92
  • 97.92
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
686
  • 686
97.71
  • 97.71
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
692
  • 692
97.69
  • 97.69
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000104life cycle
784
  • 784
  • 1.53e3
  • 1.49e4
97.38
  • 97.38
  • 94.87
  • 49.94
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
839
  • 839
  • 853
97.19
  • 97.19
  • 97.15
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
883
  • 883
97.05
  • 97.05
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
932
  • 932
96.88
  • 96.88
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
967
  • 967
96.77
  • 96.77
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.02e3
  • 1.02e3
96.58
  • 96.58
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.06e3
  • 1.06e3
96.44
  • 96.44
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.06e3
  • 1.06e3
96.44
  • 96.44
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.07e3
  • 1.07e3
96.41
  • 96.41
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
1.15e3
  • 1.15e3
  • 1.55e3
  • 1.66e3
96.15
  • 96.15
  • 94.82
  • 94.44
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.24e3
  • 1.24e3
95.87
  • 95.87
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.30e3
  • 1.30e3
95.64
  • 95.64
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
1.65e3
  • 1.65e3
  • 1.77e3
94.49
  • 94.49
  • 94.07
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.92e3
  • 1.92e3
93.59
  • 93.59
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.98e3
  • 1.98e3
93.39
  • 93.39
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.49e3
  • 2.49e3
91.65
  • 91.65
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
3.10e3
  • 3.10e3
89.62
  • 89.62
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
3.43e3
  • 3.43e3
88.52
  • 88.52
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000066fully formed stage
1.32e4
  • 1.32e4
  • 1.50e4
55.82
  • 55.82
  • 49.94
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression

Paralogy information comes from OMA : ENSDARG00000061735.

Cross-references

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