D. rerio Gene: rabgap1l - ENSDARG00000061757 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000061757
Namerabgap1l
DescriptionRAB GTPase activating protein 1-like [Source:ZFIN;Acc:ZDB-GENE-050208-389]
OrganismDanio rerio (zebrafish)
Synonym(s)si:ch211-197g15.12
Orthologs(s)24 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
959
  • 959
96.79
  • 96.79
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
992
  • 992
96.68
  • 96.68
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.01e3
  • 1.01e3
96.61
  • 96.61
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.28e3
  • 1.28e3
95.70
  • 95.70
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.45e3
  • 1.45e3
95.16
  • 95.16
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000040Larval:Days 14-20
  • UBERON:0000106zygote stage
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
1.51e3
  • 1.51e3
  • 2.71e3
  • 3.08e3
  • 3.11e3
  • 4.22e3
  • 4.22e3
  • 5.34e3
  • 5.37e3
  • 6.70e3
  • 7.74e3
  • 7.80e3
  • 8.01e3
  • 8.47e3
  • 8.73e3
94.96
  • 94.96
  • 90.93
  • 89.70
  • 89.58
  • 85.88
  • 85.87
  • 82.13
  • 82.00
  • 77.58
  • 74.08
  • 73.90
  • 73.19
  • 71.62
  • 70.75
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
1.59e3
  • 1.59e3
  • 4.25e3
94.68
  • 94.68
  • 85.76
AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
1.92e3
  • 1.92e3
  • 2.24e3
93.57
  • 93.57
  • 92.51
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
2.01e3
  • 2.01e3
93.27
  • 93.27
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000024Segmentation:5-9 somites
2.14e3
  • 2.14e3
  • 2.55e3
  • 3.33e3
  • 4.25e3
  • 4.91e3
  • 5.48e3
  • 5.81e3
  • 6.02e3
  • 6.15e3
  • 6.77e3
92.83
  • 92.83
  • 91.47
  • 88.85
  • 85.76
  • 83.57
  • 81.65
  • 80.54
  • 79.86
  • 79.41
  • 77.35
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
2.44e3
  • 2.44e3
  • 3.99e3
91.83
  • 91.83
  • 86.64
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
2.46e3
  • 2.46e3
  • 2.56e3
  • 3.23e3
91.76
  • 91.76
  • 91.41
  • 89.20
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
2.46e3
  • 2.46e3
91.75
  • 91.75
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.54e3
  • 2.54e3
91.51
  • 91.51
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
2.61e3
  • 2.61e3
  • 2.79e3
91.28
  • 91.28
  • 90.65
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
2.66e3
  • 2.66e3
  • 3.17e3
  • 3.24e3
  • 4.14e3
91.11
  • 91.11
  • 89.39
  • 89.16
  • 86.15
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.95e3
  • 2.95e3
90.13
  • 90.13
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
3.13e3
  • 3.13e3
89.51
  • 89.51
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
3.34e3
  • 3.34e3
88.82
  • 88.82
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000014Blastula:Sphere
3.41e3
  • 3.41e3
  • 3.59e3
  • 3.60e3
  • 3.63e3
  • 3.70e3
88.58
  • 88.58
  • 87.98
  • 87.94
  • 87.86
  • 87.60
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
4.11e3
  • 4.11e3
86.24
  • 86.24
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
4.25e3
  • 4.25e3
85.77
  • 85.77
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
4.31e3
  • 4.31e3
85.56
  • 85.56
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
4.35e3
  • 4.35e3
85.44
  • 85.44
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
4.39e3
  • 4.39e3
85.31
  • 85.31
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
4.42e3
  • 4.42e3
85.19
  • 85.19
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
4.71e3
  • 4.71e3
84.22
  • 84.22
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
5.47e3
  • 5.47e3
81.68
  • 81.68
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
5.78e3
  • 5.78e3
80.66
  • 80.66
AEIR
  • AEIR
UBERON:0004734gastrula
  • UBERON:0000109gastrula stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
6.41e3
  • 6.41e3
  • 7.33e3
  • 8.13e3
  • 8.17e3
  • 9.74e3
  • 1.04e4
78.54
  • 78.54
  • 75.47
  • 72.79
  • 72.65
  • 67.40
  • 65.02
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi18 species18 genesCompare expression
Bilateria24 species24 genesCompare expression

Orthology information comes from OMA : ENSDARG00000061757.

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression

Paralogy information comes from OMA : ENSDARG00000061757.

Cross-references

EnsemblENSDARG00000061757 (rabgap1l)
ZFINZDB-GENE-050208-389 (rabgap1l)
EMBLBX649327, CABZ01019835
Uniprot/SPTREMBLE9QDE9, E9QDE9_DANRE, Q1LVY2, Q1LVY2_DANRE, Q1LVY3, Q1LVY3_DANRE

Do not show this banner again