Gene: bmp10 - ENSDARG00000061769 - Danio rerio (zebrafish)

General information

Ensembl ID	ENSDARG00000061769
Name	bmp10
Description	bone morphogenetic protein 10 [Source:ZFIN;Acc:ZDB-GENE-060526-211]
Organism	Danio rerio (zebrafish)
Synonym(s)	si:dkey-13n15.5
Orthologs(s)	15 orthologs
Paralog(s)	1 paralogs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0000948	heart	[+] 2 stages ZFS:0000036Larval:Day 4 UBERON:0000066fully formed stage	3.54e3 3.54e3 4.67e3	88.17 88.17 84.38	AEIR AEIR AEIR
UBERON:0000206	pharyngeal gill	[+] 1 stage UBERON:0000066fully formed stage	9.61e3 9.61e3	67.83 67.83	AEIR AEIR
UBERON:0004141	heart tube	[+] 1 stage ZFS:0000029Pharyngula:Prim-5	1.05e4 1.05e4	64.99 64.99	AEIR AEIR
UBERON:0006283	future cardiac ventricle	[+] 1 stage ZFS:0000031Pharyngula:Prim-25	1.12e4 1.12e4	62.50 62.50	AEIR AEIR
CL:0000094	granulocyte	[+] 1 stage UBERON:0000066fully formed stage	1.17e4 1.17e4	60.74 60.74	AEIR AEIR
UBERON:0002081	cardiac atrium	[+] 1 stage ZFS:0000033Hatching:Long-pec	1.31e4 1.31e4	56.24 56.24	AEIR AEIR
UBERON:0002165	endocardium	[+] 1 stage ZFS:0000031Pharyngula:Prim-25	1.49e4 1.49e4	50.00 50.00	AEIR AEIR
UBERON:0010227	future cardiac atrium	[+] 1 stage ZFS:0000031Pharyngula:Prim-25	1.49e4 1.49e4	50.00 50.00	AEIR AEIR
UBERON:0002082	cardiac ventricle	[+] 1 stage ZFS:0000033Hatching:Long-pec	1.49e4 1.49e4	49.99 49.99	AEIR AEIR
UBERON:0002107	liver	[+] 1 stage UBERON:0000066fully formed stage	1.54e4 1.54e4	48.29 48.29	AEIR AEIR
UBERON:0000033	head	[+] 1 stage UBERON:0000066fully formed stage	1.70e4 1.70e4	42.96 42.96	AEIR AEIR
UBERON:0000922	embryo	[+] 3 stages UBERON:0000068embryo stage UBERON:0004707pharyngula stage ZFS:0000037Larval:Day 5	2.00e4 2.00e4 2.34e4 2.59e4	33.03 33.03 21.59 13.28	AEIR AEIR AEIR AEIR
UBERON:0007132	head kidney	[+] 1 stage UBERON:0000066fully formed stage	2.18e4 2.18e4	26.86 26.86	AEIR AEIR
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000066fully formed stage	2.25e4 2.25e4	24.50 24.50	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

EST data: Bgee
In situ hybridization data: ZFIN
RNA-Seq data: Bgee

Sources of raw data:

EST data: UniGene
In situ hybridization data: ZFIN
RNA-Seq data: GEO

Orthologs

Taxon name	Species with orthologs	Gene(s)	Expression comparison	See details
Euteleostomi	15 species Homo sapiens (human) Mus musculus (mouse) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Rattus norvegicus (rat) Bos taurus (cattle) Equus caballus (horse) Oryctolagus cuniculus (rabbit) Canis lupus familiaris (dog) Felis catus (cat) Cavia porcellus (guinea pig) Erinaceus europaeus (hedgehog) Ornithorhynchus anatinus (platypus) Gallus gallus (chicken) Xenopus tropicalis (western clawed frog)	15 genes ENSG00000163217 BMP10 ENSMUSG00000030046 Bmp10 ENSGGOG00000013600 BMP10 ENSMMUG00000015055 BMP10 ENSRNOG00000009316 Bmp10 ENSBTAG00000000992 BMP10 ENSECAG00000007670 BMP10 ENSOCUG00000010221 BMP10 ENSCAFG00000003271 BMP10 ENSFCAG00000025485 BMP10 ENSCPOG00000019825 BMP10 ENSEEUG00000001938 BMP10 ENSOANG00000013884 BMP10 ENSGALG00000000120 BMP-10 ENSXETG00000008196 bmp10	Compare expression	[+]

Orthology information comes from OMA : ENSDARG00000061769.

Paralogs (same species)

Taxon name	Gene(s)	Expression comparison	See details
Chordata	1 gene ENSDARG00000059173 gdf2	Compare expression	[+]

Paralogy information comes from OMA : ENSDARG00000061769.

Cross-references

Ensembl	ENSDARG00000061769 (bmp10)
ZFIN	ZDB-GENE-060526-211 (bmp10)
EMBL	BC163861, BX470224
Uniprot/SPTREMBL	A2BGK2, A2BGK2_DANRE