D. rerio Gene: OCEL1 - ENSDARG00000061800 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000061800
NameOCEL1
Descriptionsi:dkey-208k22.6 [Source:ZFIN;Acc:ZDB-GENE-070912-433]
OrganismDanio rerio (zebrafish)
Synonym(s)flj22709
Orthologs(s)1 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0000066fully formed stage
6.83e3
  • 6.83e3
77.14
  • 77.14
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
7.24e3
  • 7.24e3
75.77
  • 75.77
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.03e4
  • 1.03e4
65.45
  • 65.45
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
1.08e4
  • 1.08e4
  • 1.31e4
64.00
  • 64.00
  • 56.04
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.10e4
  • 1.10e4
63.11
  • 63.11
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.42e4
  • 1.42e4
52.54
  • 52.54
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.51e4
  • 1.51e4
49.39
  • 49.39
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.54e4
  • 1.54e4
48.60
  • 48.60
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.54e4
  • 1.54e4
48.29
  • 48.29
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.63e4
  • 1.63e4
45.43
  • 45.43
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.66e4
  • 1.66e4
44.44
  • 44.44
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
1.73e4
  • 1.73e4
42.06
  • 42.06
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.76e4
  • 1.76e4
  • 2.06e4
41.15
  • 41.15
  • 30.86
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.76e4
  • 1.76e4
40.99
  • 40.99
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.83e4
  • 1.83e4
38.80
  • 38.80
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.89e4
  • 1.89e4
36.61
  • 36.61
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
1.93e4
  • 1.93e4
  • 2.00e4
  • 2.10e4
  • 2.26e4
35.26
  • 35.26
  • 33.08
  • 29.82
  • 24.32
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.32e4
  • 2.32e4
22.39
  • 22.39
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi1 species1 geneCompare expression

Orthology information comes from OMA : ENSDARG00000061800.

Cross-references

EnsemblENSDARG00000061800 (OCEL1)
HGNCHGNC:26221 (OCEL1)
ZFINZDB-GENE-070912-433 (si:dkey-208k22.6)
EMBLCR384062
Uniprot/SPTREMBLB0UXT0, B0UXT0_DANRE, X1WD40, X1WD40_DANRE

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