D. rerio Gene: si:dkey-110c1.10 - ENSDARG00000061810 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000061810
Namesi:dkey-110c1.10
Descriptionsi:dkey-110c1.10 [Source:ZFIN;Acc:ZDB-GENE-050208-429]
OrganismDanio rerio (zebrafish)
Synonym(s)si:dkey-110c1.9
Paralog(s)7 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.49e3
  • 1.49e3
95.03
  • 95.03
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
4.59e3
  • 4.59e3
84.65
  • 84.65
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
8.48e3
  • 8.48e3
71.60
  • 71.60
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
8.49e3
  • 8.49e3
71.58
  • 71.58
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.08e4
  • 1.08e4
63.97
  • 63.97
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.18e4
  • 1.18e4
60.40
  • 60.40
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
1.49e4
  • 1.49e4
  • 1.60e4
50.21
  • 50.21
  • 46.48
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.53e4
  • 1.53e4
48.71
  • 48.71
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.56e4
  • 1.56e4
47.67
  • 47.67
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.58e4
  • 1.58e4
46.95
  • 46.95
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.59e4
  • 1.59e4
46.67
  • 46.67
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
1.70e4
  • 1.70e4
  • 1.80e4
  • 1.81e4
  • 1.94e4
43.23
  • 43.23
  • 39.67
  • 39.31
  • 35.15
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.81e4
  • 1.81e4
39.40
  • 39.40
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.90e4
  • 1.90e4
  • 1.91e4
36.38
  • 36.38
  • 35.91
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.97e4
  • 1.97e4
34.03
  • 34.03
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
2.26e4
  • 2.26e4
24.48
  • 24.48
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.59e4
  • 2.59e4
13.14
  • 13.14
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Opisthokonta7 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000061810.

Cross-references

EnsemblENSDARG00000061810 (si:dkey-110c1.10)
ZFINZDB-GENE-050208-429 (si:dkey-110c1.10)
Uniprot/SPTREMBLF1QPJ2, F1QPJ2_DANRE, F1QXS0, F1QXS0_DANRE, F1QYD8, F1QYD8_DANRE

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