D. rerio Gene: lman2 - ENSDARG00000061854 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000061854
Namelman2
Descriptionlectin, mannose-binding 2 [Source:ZFIN;Acc:ZDB-GENE-070209-149]
OrganismDanio rerio (zebrafish)
Synonym(s)wu:fb16f04, zgc:158761
Orthologs(s)25 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • UBERON:0000109gastrula stage
842
  • 842
  • 1.48e3
  • 1.49e3
  • 1.73e3
  • 1.82e3
  • 2.72e3
97.18
  • 97.18
  • 95.03
  • 95.00
  • 94.20
  • 93.90
  • 90.90
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
865
  • 865
97.11
  • 97.11
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
990
  • 990
  • 1.51e3
  • 1.96e3
  • 2.02e3
  • 2.67e3
96.69
  • 96.69
  • 94.94
  • 93.45
  • 93.25
  • 91.06
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:0000106zygote stage
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000036Larval:Day 4
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000037Larval:Day 5
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000023Segmentation:1-4 somites
  • UBERON:0004707pharyngula stage
  • UBERON:00072322 cell stage
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • ZFS:0000006Cleavage:32-cell
  • ZFS:0000007Cleavage:64-cell
  • ZFS:0000008Blastula:128-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000010Blastula:512-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000012Blastula:High
  • ZFS:0000013Blastula:Oblong
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
  • UBERON:0000068embryo stage
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
1.07e3
  • 1.07e3
  • 1.15e3
  • 1.24e3
  • 1.29e3
  • 1.46e3
  • 1.56e3
  • 2.07e3
  • 2.25e3
  • 2.34e3
  • 2.44e3
  • 2.78e3
  • 2.96e3
  • 3.05e3
  • 4.38e3
  • 4.98e3
  • 6.54e3
  • 6.64e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.97e3
  • 7.03e3
  • 7.47e3
  • 7.47e3
  • 7.91e3
  • 8.96e3
  • 8.96e3
  • 1.10e4
  • 1.33e4
  • 1.47e4
96.40
  • 96.40
  • 96.15
  • 95.85
  • 95.68
  • 95.11
  • 94.78
  • 93.08
  • 92.47
  • 92.15
  • 91.83
  • 90.69
  • 90.10
  • 89.78
  • 85.35
  • 83.33
  • 78.12
  • 77.77
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 76.66
  • 76.46
  • 74.99
  • 74.99
  • 73.52
  • 69.99
  • 69.99
  • 63.16
  • 55.48
  • 50.90
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.19e3
  • 1.19e3
96.02
  • 96.02
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.34e3
  • 1.34e3
95.51
  • 95.51
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.41e3
  • 1.41e3
95.27
  • 95.27
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.47e3
  • 1.47e3
95.09
  • 95.09
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000037Larval:Day 5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
1.48e3
  • 1.48e3
  • 1.63e3
  • 2.04e3
  • 2.20e3
  • 2.34e3
  • 2.46e3
  • 2.77e3
  • 2.85e3
  • 3.01e3
  • 3.58e3
95.04
  • 95.04
  • 94.56
  • 93.18
  • 92.64
  • 92.16
  • 91.78
  • 90.73
  • 90.44
  • 89.93
  • 88.03
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.49e3
  • 1.49e3
95.03
  • 95.03
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.60e3
  • 1.60e3
94.63
  • 94.63
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
1.78e3
  • 1.78e3
  • 1.47e4
94.05
  • 94.05
  • 50.63
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.92e3
  • 1.92e3
  • 2.10e3
93.59
  • 93.59
  • 92.98
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.92e3
  • 1.92e3
93.58
  • 93.58
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
2.00e3
  • 2.00e3
93.30
  • 93.30
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
2.00e3
  • 2.00e3
93.30
  • 93.30
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
2.06e3
  • 2.06e3
93.12
  • 93.12
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.06e3
  • 2.06e3
93.10
  • 93.10
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.09e3
  • 2.09e3
93.01
  • 93.01
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.13e3
  • 2.13e3
92.86
  • 92.86
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
2.33e3
  • 2.33e3
92.22
  • 92.22
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.37e3
  • 2.37e3
92.07
  • 92.07
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
2.42e3
  • 2.42e3
91.91
  • 91.91
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
2.47e3
  • 2.47e3
  • 3.64e3
91.75
  • 91.75
  • 87.82
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
2.54e3
  • 2.54e3
  • 2.96e3
91.50
  • 91.50
  • 90.09
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
3.34e3
  • 3.34e3
  • 3.45e3
  • 3.76e3
88.81
  • 88.81
  • 88.46
  • 87.41
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
3.35e3
  • 3.35e3
88.78
  • 88.78
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
3.37e3
  • 3.37e3
  • 4.63e3
88.72
  • 88.72
  • 84.51
AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
3.47e3
  • 3.47e3
88.37
  • 88.37
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
3.58e3
  • 3.58e3
  • 4.61e3
  • 5.31e3
  • 7.16e3
88.01
  • 88.01
  • 84.57
  • 82.23
  • 76.01
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
3.81e3
  • 3.81e3
87.25
  • 87.25
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
4.83e3
  • 4.83e3
83.82
  • 83.82
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
7.04e3
  • 7.04e3
76.45
  • 76.45
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi17 species18 genesCompare expression
Bilateria24 species25 genesCompare expression

Orthology information comes from OMA : ENSDARG00000061854.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Eumetazoa2 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000061854.

Cross-references

EnsemblENSDARG00000061854 (lman2)
ZFINZDB-GENE-070209-149 (lman2)
EMBLBX323077
Uniprot/SPTREMBLA5PMC4, A5PMC4_DANRE

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