D. rerio Gene: slco2a1 - ENSDARG00000061896 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000061896
Nameslco2a1
Descriptionsolute carrier organic anion transporter family, member 2A1 [Source:ZFIN;Acc:ZDB-GENE-060606-3]
OrganismDanio rerio (zebrafish)
Synonym(s)oatp2a1, zoatp2a3
Orthologs(s)17 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0000066fully formed stage
700
  • 700
97.66
  • 97.66
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.25e3
  • 2.25e3
92.48
  • 92.48
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.71e3
  • 2.71e3
90.92
  • 90.92
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
2.78e3
  • 2.78e3
90.68
  • 90.68
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
4.56e3
  • 4.56e3
84.73
  • 84.73
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
4.59e3
  • 4.59e3
84.65
  • 84.65
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
4.70e3
  • 4.70e3
  • 1.41e4
84.26
  • 84.26
  • 52.78
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
5.65e3
  • 5.65e3
81.07
  • 81.07
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
7.08e3
  • 7.08e3
76.28
  • 76.28
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
7.27e3
  • 7.27e3
  • 1.44e4
75.67
  • 75.67
  • 51.85
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
8.60e3
  • 8.60e3
71.19
  • 71.19
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
8.74e3
  • 8.74e3
70.74
  • 70.74
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
9.76e3
  • 9.76e3
67.33
  • 67.33
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.02e4
  • 1.02e4
  • 1.13e4
65.77
  • 65.77
  • 62.08
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.04e4
  • 1.04e4
65.20
  • 65.20
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
1.12e4
  • 1.12e4
  • 1.41e4
  • 1.78e4
  • 1.97e4
  • 2.01e4
62.50
  • 62.50
  • 52.91
  • 40.53
  • 33.92
  • 32.54
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
1.41e4
  • 1.41e4
52.63
  • 52.63
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.59e4
  • 1.59e4
46.63
  • 46.63
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.61e4
  • 1.61e4
46.22
  • 46.22
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.72e4
  • 1.72e4
42.44
  • 42.44
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.79e4
  • 1.79e4
40.13
  • 40.13
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Cross-references

EnsemblENSDARG00000061896 (slco2a1)
ZFINZDB-GENE-060606-3 (slco2a1)
EMBLAL935299, BX890558, CR385091
Uniprot/SPTREMBLF1Q9B1, F1Q9B1_DANRE, F1R7S2, F1R7S2_DANRE

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