D. rerio Gene: golgb1 - ENSDARG00000061951 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000061951
Namegolgb1
Descriptiongolgin B1 [Source:ZFIN;Acc:ZDB-GENE-030429-9]
OrganismDanio rerio (zebrafish)
Synonym(s)f1qsp1, sb:cb277, wu:fb47h05, wu:fb92f11
Orthologs(s)18 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
3.53e3
  • 3.53e3
88.18
  • 88.18
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
3.77e3
  • 3.77e3
  • 6.74e3
87.37
  • 87.37
  • 77.43
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • UBERON:0000068embryo stage
  • ZFS:0000026Segmentation:14-19 somites
  • UBERON:0004707pharyngula stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
5.22e3
  • 5.22e3
  • 7.28e3
  • 8.23e3
  • 8.35e3
  • 9.21e3
  • 9.63e3
  • 9.77e3
  • 1.04e4
  • 1.23e4
  • 1.31e4
82.52
  • 82.52
  • 75.62
  • 72.45
  • 72.05
  • 69.15
  • 67.77
  • 67.28
  • 65.32
  • 58.95
  • 56.28
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
5.50e3
  • 5.50e3
  • 6.06e3
  • 6.33e3
  • 6.60e3
  • 8.43e3
  • 8.62e3
81.60
  • 81.60
  • 79.70
  • 78.82
  • 77.89
  • 71.76
  • 71.15
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
5.53e3
  • 5.53e3
  • 6.05e3
  • 9.22e3
  • 9.88e3
81.50
  • 81.50
  • 79.75
  • 69.14
  • 66.93
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
  • UBERON:0000106zygote stage
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
5.67e3
  • 5.67e3
  • 5.79e3
  • 6.10e3
  • 6.38e3
  • 6.60e3
  • 6.71e3
  • 7.00e3
  • 7.04e3
  • 7.33e3
  • 7.48e3
  • 7.93e3
  • 8.14e3
  • 8.73e3
  • 8.74e3
81.03
  • 81.03
  • 80.61
  • 79.59
  • 78.64
  • 77.90
  • 77.54
  • 76.57
  • 76.44
  • 75.46
  • 74.96
  • 73.45
  • 72.74
  • 70.76
  • 70.75
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
6.14e3
  • 6.14e3
79.43
  • 79.43
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
6.23e3
  • 6.23e3
79.13
  • 79.13
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
6.76e3
  • 6.76e3
77.36
  • 77.36
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
6.79e3
  • 6.79e3
77.28
  • 77.28
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
6.94e3
  • 6.94e3
76.76
  • 76.76
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
7.14e3
  • 7.14e3
76.10
  • 76.10
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
7.14e3
  • 7.14e3
76.10
  • 76.10
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
7.26e3
  • 7.26e3
75.68
  • 75.68
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
7.29e3
  • 7.29e3
75.60
  • 75.60
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
7.31e3
  • 7.31e3
  • 7.79e3
  • 8.81e3
  • 1.08e4
  • 1.08e4
75.52
  • 75.52
  • 73.92
  • 70.51
  • 63.89
  • 63.85
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
7.36e3
  • 7.36e3
75.35
  • 75.35
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
7.72e3
  • 7.72e3
74.14
  • 74.14
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
7.95e3
  • 7.95e3
73.39
  • 73.39
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
7.95e3
  • 7.95e3
73.39
  • 73.39
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
8.01e3
  • 8.01e3
73.20
  • 73.20
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
8.24e3
  • 8.24e3
72.42
  • 72.42
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
8.27e3
  • 8.27e3
  • 8.34e3
72.31
  • 72.31
  • 72.08
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
8.40e3
  • 8.40e3
71.86
  • 71.86
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
8.50e3
  • 8.50e3
71.53
  • 71.53
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
8.54e3
  • 8.54e3
  • 9.22e3
71.40
  • 71.40
  • 69.14
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
8.69e3
  • 8.69e3
70.92
  • 70.92
AEIR
  • AEIR
UBERON:0003058hypochord
  • ZFS:0000026Segmentation:14-19 somites
8.96e3
  • 8.96e3
69.99
  • 69.99
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
9.23e3
  • 9.23e3
  • 9.97e3
  • 1.09e4
69.10
  • 69.10
  • 66.62
  • 63.47
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
9.48e3
  • 9.48e3
68.26
  • 68.26
AEIR
  • AEIR
UBERON:0003079floor plate
  • ZFS:0000026Segmentation:14-19 somites
9.96e3
  • 9.96e3
66.65
  • 66.65
AEIR
  • AEIR
UBERON:2000058polster
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
9.96e3
  • 9.96e3
  • 9.96e3
  • 1.05e4
66.65
  • 66.65
  • 66.65
  • 64.98
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.08e4
  • 1.08e4
63.81
  • 63.81
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.09e4
  • 1.09e4
63.64
  • 63.64
AEIR
  • AEIR
UBERON:0003069otic placode
  • ZFS:0000026Segmentation:14-19 somites
1.10e4
  • 1.10e4
63.14
  • 63.14
AEIR
  • AEIR
ZFA:0000092axis (Danio)
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000021Gastrula:90%-epiboly
1.16e4
  • 1.16e4
  • 1.16e4
  • 1.16e4
  • 1.23e4
  • 1.23e4
  • 1.23e4
61.09
  • 61.09
  • 61.09
  • 61.09
  • 58.80
  • 58.80
  • 58.80
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Cross-references

EnsemblENSDARG00000061951 (golgb1)
ZFINZDB-GENE-030429-9 (golgb1)
EMBLBX537162
Uniprot/SPTREMBLF1QMB4, F1QMB4_DANRE

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