D. rerio Gene: ppfibp2a - ENSDARG00000061977 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000061977
Nameppfibp2a
DescriptionPTPRF interacting protein, binding protein 2a (liprin beta 2) [Source:ZFIN;Acc:ZDB-GENE-070705-277]
OrganismDanio rerio (zebrafish)
Synonym(s)si:dkey-105j11.1, si:dkey-105j11.2
Orthologs(s)1 orthologs
Paralog(s)3 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.58e3
  • 1.58e3
  • 3.93e3
94.71
  • 94.71
  • 86.83
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
2.00e3
  • 2.00e3
93.31
  • 93.31
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
5.05e3
  • 5.05e3
83.10
  • 83.10
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
5.30e3
  • 5.30e3
  • 7.02e3
  • 7.13e3
  • 7.25e3
  • 1.23e4
82.27
  • 82.27
  • 76.49
  • 76.13
  • 75.72
  • 58.88
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
7.01e3
  • 7.01e3
76.55
  • 76.55
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
7.19e3
  • 7.19e3
75.93
  • 75.93
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
7.59e3
  • 7.59e3
74.59
  • 74.59
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
7.87e3
  • 7.87e3
  • 1.26e4
73.64
  • 73.64
  • 57.97
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
8.44e3
  • 8.44e3
  • 8.63e3
71.75
  • 71.75
  • 71.11
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
9.33e3
  • 9.33e3
68.75
  • 68.75
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.16e4
  • 1.16e4
61.27
  • 61.27
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.19e4
  • 1.19e4
60.31
  • 60.31
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.28e4
  • 1.28e4
57.02
  • 57.02
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.60e4
  • 1.60e4
46.33
  • 46.33
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.68e4
  • 1.68e4
43.85
  • 43.85
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.79e4
  • 1.79e4
39.96
  • 39.96
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.80e4
  • 1.80e4
39.66
  • 39.66
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.84e4
  • 1.84e4
38.48
  • 38.48
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.02e4
  • 2.02e4
32.26
  • 32.26
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Bilateria1 species1 geneCompare expression

Orthology information comes from OMA : ENSDARG00000061977.

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Bilateria3 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000061977.

Cross-references

EnsemblENSDARG00000061977 (ppfibp2a)
ZFINZDB-GENE-070705-277 (ppfibp2a)
EMBLCABZ01013021, CABZ01013022, CABZ01013023, CT025546
Uniprot/SPTREMBLA5WVJ4, A5WVJ4_DANRE, F1QBQ0, F1QBQ0_DANRE, F1R2Z6, F1R2Z6_DANRE

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