Gene: gpr18 - ENSDARG00000062009 - Danio rerio (zebrafish)

General information

Ensembl ID	ENSDARG00000062009
Name	gpr18
Description	G protein-coupled receptor 18 [Source:ZFIN;Acc:ZDB-GENE-070912-159]
Organism	Danio rerio (zebrafish)
Synonym(s)	si:ch211-184m13.2
Orthologs(s)	16 orthologs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0002106	spleen	[+] 1 stage UBERON:0000066fully formed stage	4.14e3 4.14e3	86.13 86.13	AEIR AEIR
CL:0000094	granulocyte	[+] 1 stage UBERON:0000066fully formed stage	4.65e3 4.65e3	84.42 84.42	AEIR AEIR
UBERON:0000160	intestine	[+] 1 stage UBERON:0000066fully formed stage	8.58e3 8.58e3	71.26 71.26	AEIR AEIR
UBERON:0000206	pharyngeal gill	[+] 1 stage UBERON:0000066fully formed stage	1.18e4 1.18e4	60.41 60.41	AEIR AEIR
UBERON:0002113	kidney	[+] 1 stage UBERON:0000066fully formed stage	1.31e4 1.31e4	56.20 56.20	AEIR AEIR
UBERON:0002107	liver	[+] 1 stage UBERON:0000066fully formed stage	1.34e4 1.34e4	54.98 54.98	AEIR AEIR
UBERON:0002481	bone tissue	[+] 1 stage UBERON:0000066fully formed stage	1.44e4 1.44e4	51.88 51.88	AEIR AEIR
UBERON:0007132	head kidney	[+] 1 stage UBERON:0000066fully formed stage	1.51e4 1.51e4	49.28 49.28	AEIR AEIR
UBERON:0002385	muscle tissue	[+] 1 stage UBERON:0000066fully formed stage	1.60e4 1.60e4	46.42 46.42	AEIR AEIR
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000066fully formed stage	1.62e4 1.62e4	45.79 45.79	AEIR AEIR
UBERON:0000948	heart	[+] 1 stage UBERON:0000066fully formed stage	1.68e4 1.68e4	43.69 43.69	AEIR AEIR
UBERON:0001630	muscle organ	[+] 1 stage UBERON:0000066fully formed stage	1.82e4 1.82e4	39.17 39.17	AEIR AEIR
UBERON:0000033	head	[+] 1 stage UBERON:0000066fully formed stage	1.87e4 1.87e4	37.27 37.27	AEIR AEIR
UBERON:0000955	brain	[+] 1 stage UBERON:0000066fully formed stage	1.88e4 1.88e4	37.00 37.00	AEIR AEIR
UBERON:0002415	tail	[+] 1 stage UBERON:0000066fully formed stage	1.89e4 1.89e4	36.67 36.67	AEIR AEIR
UBERON:0006860	swim bladder	[+] 1 stage UBERON:0000066fully formed stage	1.98e4 1.98e4	33.65 33.65	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Orthologs

Taxon name	Species with orthologs	Gene(s)	Expression comparison	See details
Euteleostomi	16 species Homo sapiens (human) Mus musculus (mouse) Pan troglodytes (chimpanzee) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Rattus norvegicus (rat) Bos taurus (cattle) Equus caballus (horse) Oryctolagus cuniculus (rabbit) Canis lupus familiaris (dog) Felis catus (cat) Cavia porcellus (guinea pig) Ornithorhynchus anatinus (platypus) Gallus gallus (chicken) Anolis carolinensis (green anole) Xenopus tropicalis (western clawed frog)	16 genes ENSG00000125245 GPR18 ENSMUSG00000050350 Gpr18 ENSPTRG00000005995 GPR18 ENSGGOG00000015697 GPR18 ENSMMUG00000012336 GPR18 ENSRNOG00000012628 Gpr18 ENSBTAG00000002240 GPR18 ENSECAG00000023448 GPR18 ENSOCUG00000002032 GPR18 ENSCAFG00000005800 GPR18 ENSFCAG00000029380 GPR18 ENSCPOG00000008603 GPR18 ENSOANG00000005471 ENSGALG00000022750 GPR18 ENSACAG00000016796 GPR18 ENSXETG00000032224 GPR18	Compare expression	[+]

Orthology information comes from OMA : ENSDARG00000062009.

Cross-references

Ensembl	ENSDARG00000062009 (gpr18)
ZFIN	ZDB-GENE-070912-159 (gpr18)
EMBL	BX470183
Uniprot/SPTREMBL	F1QLF4, F1QLF4_DANRE, X1WHT3, X1WHT3_DANRE