D. rerio Gene: vps51 - ENSDARG00000062016 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000062016
Namevps51
Descriptionvacuolar protein sorting 51 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-6008]
OrganismDanio rerio (zebrafish)
Synonym(s)ang2, c11orf2, fat free, fat-free, ffr, fi30b05, wu:fi30b05
Orthologs(s)24 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
3.78e3
  • 3.78e3
  • 4.36e3
  • 5.21e3
  • 6.36e3
  • 7.05e3
87.34
  • 87.34
  • 85.41
  • 82.55
  • 78.71
  • 76.40
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
4.55e3
  • 4.55e3
84.77
  • 84.77
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000036Larval:Day 4
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
4.99e3
  • 4.99e3
  • 9.45e3
  • 1.03e4
  • 1.07e4
  • 1.07e4
  • 1.10e4
  • 1.10e4
  • 1.12e4
  • 1.12e4
  • 1.13e4
  • 1.14e4
  • 1.14e4
  • 1.15e4
  • 1.16e4
  • 1.46e4
  • 1.50e4
83.30
  • 83.30
  • 68.37
  • 65.42
  • 64.34
  • 64.32
  • 63.32
  • 63.16
  • 62.48
  • 62.45
  • 62.03
  • 61.89
  • 61.76
  • 61.43
  • 61.14
  • 51.12
  • 49.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
5.50e3
  • 5.50e3
81.60
  • 81.60
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
5.68e3
  • 5.68e3
80.99
  • 80.99
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
5.72e3
  • 5.72e3
80.84
  • 80.84
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
6.64e3
  • 6.64e3
77.76
  • 77.76
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
6.75e3
  • 6.75e3
77.39
  • 77.39
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
6.86e3
  • 6.86e3
77.04
  • 77.04
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
7.11e3
  • 7.11e3
  • 8.50e3
  • 8.93e3
  • 1.08e4
76.21
  • 76.21
  • 71.52
  • 70.10
  • 64.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
7.29e3
  • 7.29e3
  • 7.73e3
75.60
  • 75.60
  • 74.12
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
7.84e3
  • 7.84e3
73.76
  • 73.76
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
8.07e3
  • 8.07e3
73.00
  • 73.00
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
8.44e3
  • 8.44e3
  • 1.17e4
71.74
  • 71.74
  • 60.79
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
8.61e3
  • 8.61e3
  • 9.01e3
  • 9.20e3
  • 9.41e3
  • 9.72e3
  • 9.95e3
  • 1.03e4
  • 1.08e4
  • 1.08e4
  • 1.09e4
71.17
  • 71.17
  • 69.82
  • 69.20
  • 68.49
  • 67.46
  • 66.67
  • 65.37
  • 63.98
  • 63.82
  • 63.59
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
8.66e3
  • 8.66e3
70.99
  • 70.99
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
8.70e3
  • 8.70e3
70.86
  • 70.86
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
8.77e3
  • 8.77e3
70.63
  • 70.63
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
8.81e3
  • 8.81e3
  • 9.50e3
  • 9.70e3
  • 1.05e4
  • 1.14e4
  • 1.17e4
70.51
  • 70.51
  • 68.19
  • 67.54
  • 64.83
  • 61.80
  • 60.71
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
8.86e3
  • 8.86e3
70.33
  • 70.33
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
8.87e3
  • 8.87e3
  • 9.77e3
  • 1.12e4
70.31
  • 70.31
  • 67.29
  • 62.54
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
8.88e3
  • 8.88e3
  • 9.80e3
70.27
  • 70.27
  • 67.18
AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
9.03e3
  • 9.03e3
69.75
  • 69.75
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
9.27e3
  • 9.27e3
68.97
  • 68.97
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
9.31e3
  • 9.31e3
68.82
  • 68.82
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
9.60e3
  • 9.60e3
  • 1.01e4
67.85
  • 67.85
  • 66.10
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
9.67e3
  • 9.67e3
67.61
  • 67.61
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
9.76e3
  • 9.76e3
67.34
  • 67.34
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
9.98e3
  • 9.98e3
66.59
  • 66.59
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
9.98e3
  • 9.98e3
66.58
  • 66.58
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.07e4
  • 1.07e4
64.05
  • 64.05
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.17e4
  • 1.17e4
60.96
  • 60.96
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi17 species17 genesCompare expression
Bilateria24 species24 genesCompare expression

Orthology information comes from OMA : ENSDARG00000062016.

Cross-references

EnsemblENSDARG00000062016 (vps51)
ZFINZDB-GENE-030131-6008 (vps51)
EMBLCR450793
Uniprot/SPTREMBLF1QLF1, F1QLF1_DANRE

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