D. rerio Gene: CCDC181 - ENSDARG00000062021 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000062021
NameCCDC181
Descriptionsi:ch211-232d19.4 [Source:ZFIN;Acc:ZDB-GENE-060503-312]
OrganismDanio rerio (zebrafish)
Synonym(s)c1orf114, flj25846
Orthologs(s)19 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
5.04e3
  • 5.04e3
  • 1.10e4
83.11
  • 83.11
  • 63.08
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
7.06e3
  • 7.06e3
76.38
  • 76.38
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.11e4
  • 1.11e4
62.91
  • 62.91
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
1.20e4
  • 1.20e4
59.81
  • 59.81
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.24e4
  • 1.24e4
58.54
  • 58.54
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.46e4
  • 1.46e4
51.06
  • 51.06
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.47e4
  • 1.47e4
50.82
  • 50.82
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.48e4
  • 1.48e4
50.47
  • 50.47
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000024Segmentation:5-9 somites
  • UBERON:0004707pharyngula stage
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
1.53e4
  • 1.53e4
  • 1.57e4
  • 1.59e4
  • 1.60e4
  • 1.64e4
  • 1.73e4
  • 1.75e4
  • 1.81e4
  • 1.92e4
48.62
  • 48.62
  • 47.49
  • 46.83
  • 46.53
  • 45.24
  • 42.13
  • 41.56
  • 39.26
  • 35.61
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.54e4
  • 1.54e4
48.41
  • 48.41
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
1.59e4
  • 1.59e4
  • 1.65e4
  • 1.77e4
  • 1.78e4
  • 1.79e4
  • 1.80e4
  • 1.81e4
46.71
  • 46.71
  • 44.78
  • 40.62
  • 40.56
  • 40.18
  • 39.85
  • 39.42
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.64e4
  • 1.64e4
45.13
  • 45.13
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
1.68e4
  • 1.68e4
  • 1.75e4
  • 1.78e4
43.91
  • 43.91
  • 41.33
  • 40.43
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
1.70e4
  • 1.70e4
  • 1.79e4
42.98
  • 42.98
  • 40.06
AEIR
  • AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.77e4
  • 1.77e4
40.77
  • 40.77
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.05e4
  • 2.05e4
31.31
  • 31.31
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.15e4
  • 2.15e4
28.12
  • 28.12
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.40e4
  • 2.40e4
19.47
  • 19.47
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Cross-references

EnsemblENSDARG00000062021 (CCDC181)
HGNCHGNC:28051 (CCDC181)
ZFINZDB-GENE-060503-312 (si:ch211-232d19.4)
EMBLBX247907, CABZ01048841
Uniprot/SPTREMBLQ1LY09, Q1LY09_DANRE

Do not show this banner again