D. rerio Gene: ctdsplb - ENSDARG00000062116 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000062116
Namectdsplb
DescriptionCTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like b [Source:ZFIN;Acc:ZDB-GENE-060929-488]
OrganismDanio rerio (zebrafish)
Synonym(s)wu:fd18d04, zgc:154102
Orthologs(s)17 orthologs
Paralog(s)5 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
314
  • 314
98.95
  • 98.95
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
462
  • 462
98.46
  • 98.46
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000016Blastula:30%-epiboly
1.02e3
  • 1.02e3
  • 2.91e3
  • 5.70e3
  • 6.95e3
  • 7.81e3
96.60
  • 96.60
  • 90.25
  • 80.91
  • 76.74
  • 73.85
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.09e3
  • 1.09e3
96.34
  • 96.34
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.41e3
  • 1.41e3
95.30
  • 95.30
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000031Pharyngula:Prim-25
1.43e3
  • 1.43e3
  • 1.91e3
  • 2.15e3
  • 2.40e3
  • 3.93e3
  • 4.58e3
  • 4.63e3
  • 5.42e3
  • 6.70e3
  • 8.30e3
95.20
  • 95.20
  • 93.60
  • 92.79
  • 91.96
  • 86.84
  • 84.68
  • 84.52
  • 81.85
  • 77.58
  • 72.22
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
1.72e3
  • 1.72e3
  • 3.36e3
  • 3.38e3
  • 3.74e3
  • 4.16e3
  • 4.20e3
  • 4.31e3
  • 4.52e3
  • 5.40e3
  • 5.72e3
  • 5.86e3
  • 6.03e3
  • 6.95e3
  • 6.99e3
  • 1.39e4
  • 1.43e4
  • 1.47e4
94.24
  • 94.24
  • 88.74
  • 88.68
  • 87.48
  • 86.06
  • 85.93
  • 85.58
  • 84.87
  • 81.91
  • 80.84
  • 80.39
  • 79.82
  • 76.73
  • 76.61
  • 53.30
  • 52.23
  • 50.90
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.79e3
  • 1.79e3
  • 2.07e3
94.02
  • 94.02
  • 93.06
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.91e3
  • 1.91e3
93.60
  • 93.60
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
2.05e3
  • 2.05e3
93.14
  • 93.14
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
2.20e3
  • 2.20e3
92.63
  • 92.63
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
2.22e3
  • 2.22e3
92.57
  • 92.57
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
2.40e3
  • 2.40e3
  • 1.47e4
91.95
  • 91.95
  • 50.88
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.53e3
  • 2.53e3
91.52
  • 91.52
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.54e3
  • 2.54e3
91.49
  • 91.49
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • UBERON:0000109gastrula stage
2.68e3
  • 2.68e3
  • 2.69e3
  • 5.20e3
  • 5.31e3
  • 5.58e3
  • 7.67e3
91.04
  • 91.04
  • 90.98
  • 82.59
  • 82.22
  • 81.30
  • 74.32
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
2.73e3
  • 2.73e3
90.88
  • 90.88
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
2.85e3
  • 2.85e3
90.46
  • 90.46
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
3.12e3
  • 3.12e3
  • 3.54e3
89.57
  • 89.57
  • 88.14
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
3.27e3
  • 3.27e3
  • 7.52e3
89.07
  • 89.07
  • 74.81
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
3.31e3
  • 3.31e3
88.92
  • 88.92
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
3.41e3
  • 3.41e3
88.60
  • 88.60
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
3.51e3
  • 3.51e3
88.25
  • 88.25
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
3.64e3
  • 3.64e3
  • 5.16e3
  • 7.03e3
87.80
  • 87.80
  • 82.73
  • 76.46
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
3.67e3
  • 3.67e3
87.73
  • 87.73
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
3.86e3
  • 3.86e3
87.07
  • 87.07
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
3.95e3
  • 3.95e3
86.79
  • 86.79
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
4.69e3
  • 4.69e3
84.31
  • 84.31
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
4.98e3
  • 4.98e3
83.32
  • 83.32
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
5.10e3
  • 5.10e3
  • 8.70e3
  • 9.11e3
  • 1.20e4
82.91
  • 82.91
  • 70.88
  • 69.49
  • 59.77
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
5.77e3
  • 5.77e3
80.68
  • 80.68
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
6.13e3
  • 6.13e3
79.47
  • 79.47
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
7.28e3
  • 7.28e3
  • 7.67e3
75.61
  • 75.61
  • 74.33
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Bilateria1 geneCompare expression
Opisthokonta5 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000062116.

Cross-references

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