D. rerio Gene: larp4b - ENSDARG00000062146 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000062146
Namelarp4b
DescriptionLa ribonucleoprotein domain family, member 4B [Source:ZFIN;Acc:ZDB-GENE-061027-39]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:153918
Orthologs(s)18 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000066fully formed stage
761
  • 761
97.46
  • 97.46
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
3.92e3
  • 3.92e3
  • 5.88e3
86.87
  • 86.87
  • 80.31
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
4.20e3
  • 4.20e3
85.94
  • 85.94
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
4.38e3
  • 4.38e3
85.33
  • 85.33
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
4.46e3
  • 4.46e3
  • 4.77e3
  • 5.60e3
  • 5.93e3
  • 6.39e3
85.06
  • 85.06
  • 84.04
  • 81.26
  • 80.14
  • 78.60
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
4.78e3
  • 4.78e3
  • 6.03e3
84.00
  • 84.00
  • 79.79
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
4.83e3
  • 4.83e3
83.83
  • 83.83
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
5.43e3
  • 5.43e3
81.81
  • 81.81
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
6.02e3
  • 6.02e3
  • 6.17e3
79.84
  • 79.84
  • 79.34
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
6.10e3
  • 6.10e3
79.57
  • 79.57
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
6.19e3
  • 6.19e3
  • 8.60e3
79.27
  • 79.27
  • 71.20
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
6.34e3
  • 6.34e3
78.78
  • 78.78
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
6.46e3
  • 6.46e3
78.36
  • 78.36
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
6.63e3
  • 6.63e3
77.82
  • 77.82
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
6.63e3
  • 6.63e3
77.80
  • 77.80
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
6.78e3
  • 6.78e3
  • 7.17e3
77.29
  • 77.29
  • 75.98
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
6.83e3
  • 6.83e3
77.13
  • 77.13
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
6.98e3
  • 6.98e3
76.63
  • 76.63
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
7.10e3
  • 7.10e3
76.23
  • 76.23
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
7.11e3
  • 7.11e3
76.19
  • 76.19
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
7.17e3
  • 7.17e3
76.00
  • 76.00
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
7.34e3
  • 7.34e3
75.42
  • 75.42
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
8.57e3
  • 8.57e3
71.31
  • 71.31
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
8.60e3
  • 8.60e3
71.21
  • 71.21
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000066fully formed stage
1.34e4
  • 1.34e4
  • 1.46e4
55.16
  • 55.16
  • 51.26
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Cross-references

EnsemblENSDARG00000062146 (larp4b)
ZFINZDB-GENE-061027-39 (larp4b)
EMBLBC124489, BC134834, CR376848
Uniprot/SPTREMBLQ05AJ1, Q05AJ1_DANRE

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