Gene: fam65a - ENSDARG00000062178 - Danio rerio (zebrafish)

General information

Ensembl ID	ENSDARG00000062178
Name	fam65a
Description	family with sequence similarity 65, member A [Source:ZFIN;Acc:ZDB-GENE-050420-32]
Organism	Danio rerio (zebrafish)
Synonym(s)	si:dkey-45h7.2
Orthologs(s)	17 orthologs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0000948	heart	[+] 2 stages ZFS:0000036Larval:Day 4 UBERON:0000066fully formed stage	3.28e3 3.28e3 3.50e3	89.01 89.01 88.27	AEIR AEIR AEIR
UBERON:0002106	spleen	[+] 1 stage UBERON:0000066fully formed stage	4.40e3 4.40e3	85.27 85.27	AEIR AEIR
UBERON:0000307	blastula	[+] 2 stages ZFS:0000011Blastula:1k-cell ZFS:0000015Blastula:Dome	4.54e3 4.54e3 4.83e3	84.81 84.81 83.81	AEIR AEIR AEIR
UBERON:0019248	early embryo	[+] 1 stage UBERON:0000107cleavage stage	4.74e3 4.74e3	84.13 84.13	AEIR AEIR
UBERON:0004734	gastrula	[+] 2 stages ZFS:0000019Gastrula:Shield ZFS:0000022Gastrula:Bud	4.93e3 4.93e3 5.83e3	83.51 83.51 80.49	AEIR AEIR AEIR
UBERON:0002113	kidney	[+] 1 stage UBERON:0000066fully formed stage	4.98e3 4.98e3	83.33 83.33	AEIR AEIR
UBERON:0000206	pharyngeal gill	[+] 1 stage UBERON:0000066fully formed stage	5.37e3 5.37e3	82.02 82.02	AEIR AEIR
UBERON:0003982	mature ovarian follicle	[+] 1 stage UBERON:0000066fully formed stage	5.56e3 5.56e3	81.40 81.40	AEIR AEIR
UBERON:0000955	brain	[+] 1 stage UBERON:0000066fully formed stage	5.81e3 5.81e3	80.53 80.53	AEIR AEIR
UBERON:0000922	embryo	[+] 5 stages ZFS:0000029Pharyngula:Prim-5 UBERON:0000068embryo stage UBERON:0004707pharyngula stage ZFS:0000033Hatching:Long-pec ZFS:0000037Larval:Day 5	6.55e3 6.55e3 6.67e3 6.97e3 7.90e3 8.76e3	78.07 78.07 77.66 76.67 73.54 70.67	AEIR AEIR AEIR AEIR AEIR AEIR
UBERON:0006860	swim bladder	[+] 1 stage UBERON:0000066fully formed stage	6.57e3 6.57e3	78.00 78.00	AEIR AEIR
UBERON:0002481	bone tissue	[+] 1 stage UBERON:0000066fully formed stage	6.73e3 6.73e3	77.48 77.48	AEIR AEIR
UBERON:0007132	head kidney	[+] 1 stage UBERON:0000066fully formed stage	6.78e3 6.78e3	77.31 77.31	AEIR AEIR
UBERON:0000033	head	[+] 2 stages UBERON:0000066fully formed stage ZFS:0000037Larval:Day 5	6.88e3 6.88e3 9.36e3	76.95 76.95 68.67	AEIR AEIR AEIR
UBERON:0001630	muscle organ	[+] 1 stage UBERON:0000066fully formed stage	7.82e3 7.82e3	73.83 73.83	AEIR AEIR
UBERON:0002385	muscle tissue	[+] 1 stage UBERON:0000066fully formed stage	7.86e3 7.86e3	73.69 73.69	AEIR AEIR
UBERON:0002415	tail	[+] 1 stage UBERON:0000066fully formed stage	7.94e3 7.94e3	73.43 73.43	AEIR AEIR
CL:0000094	granulocyte	[+] 1 stage UBERON:0000066fully formed stage	8.06e3 8.06e3	73.02 73.02	AEIR AEIR
UBERON:0002107	liver	[+] 1 stage UBERON:0000066fully formed stage	8.10e3 8.10e3	72.88 72.88	AEIR AEIR
UBERON:0000970	eye	[+] 1 stage ZFS:0000031Pharyngula:Prim-25	8.16e3 8.16e3	72.68 72.68	AEIR AEIR
UBERON:0000966	retina	[+] 1 stage ZFS:0000037Larval:Day 5	8.41e3 8.41e3	71.83 71.83	AEIR AEIR
UBERON:0002548	larva	[+] 2 stages UBERON:0000069larval stage ZFS:0000037Larval:Day 5	8.87e3 8.87e3 9.63e3	70.31 70.31 67.76	AEIR AEIR AEIR
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000066fully formed stage	8.92e3 8.92e3	70.14 70.14	AEIR AEIR
UBERON:0000160	intestine	[+] 1 stage UBERON:0000066fully formed stage	9.55e3 9.55e3	68.01 68.01	AEIR AEIR
UBERON:0000473	testis	[+] 1 stage UBERON:0000066fully formed stage	1.21e4 1.21e4	59.42 59.42	AEIR AEIR
UBERON:0000019	camera-type eye	[+] 1 stage UBERON:0000066fully formed stage	1.46e4 1.46e4	51.26 51.26	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

EST data: Bgee
RNA-Seq data: Bgee

Sources of raw data:

EST data: UniGene
RNA-Seq data: GEO

Orthologs

Taxon name	Species with orthologs	Gene(s)	Expression comparison	See details
Euteleostomi	17 species Mus musculus (mouse) Pan troglodytes (chimpanzee) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Rattus norvegicus (rat) Bos taurus (cattle) Sus scrofa (pig) Equus caballus (horse) Oryctolagus cuniculus (rabbit) Canis lupus familiaris (dog) Felis catus (cat) Cavia porcellus (guinea pig) Erinaceus europaeus (hedgehog) Ornithorhynchus anatinus (platypus) Gallus gallus (chicken) Anolis carolinensis (green anole) Xenopus tropicalis (western clawed frog)	17 genes ENSMUSG00000038604 Fam65a ENSPTRG00000008233 FAM65A ENSGGOG00000011949 FAM65A ENSMMUG00000017105 FAM65A ENSRNOG00000017604 Fam65a ENSBTAG00000008860 FAM65A ENSSSCG00000002774 FAM65A ENSECAG00000018681 FAM65A ENSOCUG00000008968 FAM65A ENSCAFG00000020358 FAM65A ENSFCAG00000009278 FAM65A ENSCPOG00000004238 FAM65A ENSEEUG00000012420 FAM65A ENSOANG00000009323 FAM65A ENSGALG00000001809 FAM65A ENSACAG00000000866 FAM65A ENSXETG00000015614 fam65a	Compare expression	[+]

Orthology information comes from OMA : ENSDARG00000062178.

Cross-references

Ensembl	ENSDARG00000062178 (fam65a)
ZFIN	ZDB-GENE-050420-32 (fam65a)
EMBL	BX088593, BX323070
Uniprot/SPTREMBL	Q1LXK2, Q1LXK2_DANRE