Gene: si:dkey-217l24.1 - ENSDARG00000062199 - Danio rerio (zebrafish)

General information

Ensembl ID	ENSDARG00000062199
Name	si:dkey-217l24.1
Description	si:dkey-217l24.1 [Source:ZFIN;Acc:ZDB-GENE-131121-4]
Organism	Danio rerio (zebrafish)
Paralog(s)	1 paralogs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0000307	blastula	[+] 2 stages ZFS:0000011Blastula:1k-cell ZFS:0000015Blastula:Dome	9.91e3 9.91e3 1.43e4	66.81 66.81 52.13	AEIR AEIR AEIR
CL:0000094	granulocyte	[+] 1 stage UBERON:0000066fully formed stage	1.08e4 1.08e4	63.86 63.86	AEIR AEIR
UBERON:0000966	retina	[+] 1 stage ZFS:0000037Larval:Day 5	1.12e4 1.12e4	62.65 62.65	AEIR AEIR
UBERON:0000922	embryo	[+] 5 stages ZFS:0000033Hatching:Long-pec UBERON:0000068embryo stage UBERON:0004707pharyngula stage ZFS:0000029Pharyngula:Prim-5 ZFS:0000037Larval:Day 5	1.18e4 1.18e4 1.31e4 1.49e4 1.56e4 1.75e4	60.43 60.43 56.21 49.96 47.84 41.41	AEIR AEIR AEIR AEIR AEIR AEIR
UBERON:0003982	mature ovarian follicle	[+] 1 stage UBERON:0000066fully formed stage	1.22e4 1.22e4	59.18 59.18	AEIR AEIR
UBERON:0000033	head	[+] 2 stages UBERON:0000066fully formed stage ZFS:0000037Larval:Day 5	1.23e4 1.23e4 1.77e4	58.97 58.97 40.67	AEIR AEIR AEIR
UBERON:0002106	spleen	[+] 1 stage UBERON:0000066fully formed stage	1.27e4 1.27e4	57.40 57.40	AEIR AEIR
UBERON:0019248	early embryo	[+] 1 stage UBERON:0000107cleavage stage	1.30e4 1.30e4	56.38 56.38	AEIR AEIR
UBERON:0000948	heart	[+] 1 stage ZFS:0000036Larval:Day 4	1.49e4 1.49e4	50.09 50.09	AEIR AEIR
UBERON:0000955	brain	[+] 1 stage UBERON:0000066fully formed stage	1.52e4 1.52e4	49.16 49.16	AEIR AEIR
UBERON:0002113	kidney	[+] 1 stage UBERON:0000066fully formed stage	1.55e4 1.55e4	48.20 48.20	AEIR AEIR
UBERON:0002548	larva	[+] 2 stages UBERON:0000069larval stage ZFS:0000037Larval:Day 5	1.56e4 1.56e4 1.97e4	47.71 47.71 33.90	AEIR AEIR AEIR
UBERON:0007132	head kidney	[+] 1 stage UBERON:0000066fully formed stage	1.57e4 1.57e4	47.29 47.29	AEIR AEIR
UBERON:0004734	gastrula	[+] 2 stages ZFS:0000022Gastrula:Bud ZFS:0000019Gastrula:Shield	1.58e4 1.58e4 1.68e4	46.96 46.96 43.83	AEIR AEIR AEIR
UBERON:0000206	pharyngeal gill	[+] 1 stage UBERON:0000066fully formed stage	1.61e4 1.61e4	46.20 46.20	AEIR AEIR
UBERON:0000970	eye	[+] 1 stage ZFS:0000031Pharyngula:Prim-25	1.63e4 1.63e4	45.38 45.38	AEIR AEIR
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000066fully formed stage	1.65e4 1.65e4	44.63 44.63	AEIR AEIR
UBERON:0000160	intestine	[+] 1 stage UBERON:0000066fully formed stage	1.74e4 1.74e4	41.61 41.61	AEIR AEIR
UBERON:0002415	tail	[+] 1 stage UBERON:0000066fully formed stage	1.76e4 1.76e4	41.08 41.08	AEIR AEIR
UBERON:0002481	bone tissue	[+] 1 stage UBERON:0000066fully formed stage	1.91e4 1.91e4	36.13 36.13	AEIR AEIR
UBERON:0002107	liver	[+] 1 stage UBERON:0000066fully formed stage	1.93e4 1.93e4	35.21 35.21	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Paralogs (same species)

Taxon name	Gene(s)	Expression comparison	See details
Vertebrata	1 gene ENSDARG00000062020 gse1	Compare expression	[+]

Paralogy information comes from OMA : ENSDARG00000062199.

Cross-references

Ensembl	ENSDARG00000062199 (si:dkey-217l24.1)
ZFIN	ZDB-GENE-131121-4 (si:dkey-217l24.1)
EMBL	CR788297
Uniprot/SPTREMBL	E7F5N8, E7F5N8_DANRE