D. rerio Gene: si:dkey-217l24.1 - ENSDARG00000062199 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000062199
Namesi:dkey-217l24.1
Descriptionsi:dkey-217l24.1 [Source:ZFIN;Acc:ZDB-GENE-131121-4]
OrganismDanio rerio (zebrafish)
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
9.91e3
  • 9.91e3
  • 1.43e4
66.81
  • 66.81
  • 52.13
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.08e4
  • 1.08e4
63.86
  • 63.86
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
1.12e4
  • 1.12e4
62.65
  • 62.65
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
1.18e4
  • 1.18e4
  • 1.31e4
  • 1.49e4
  • 1.56e4
  • 1.75e4
60.43
  • 60.43
  • 56.21
  • 49.96
  • 47.84
  • 41.41
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.22e4
  • 1.22e4
59.18
  • 59.18
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.23e4
  • 1.23e4
  • 1.77e4
58.97
  • 58.97
  • 40.67
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.27e4
  • 1.27e4
57.40
  • 57.40
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.30e4
  • 1.30e4
56.38
  • 56.38
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
1.49e4
  • 1.49e4
50.09
  • 50.09
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.52e4
  • 1.52e4
49.16
  • 49.16
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.55e4
  • 1.55e4
48.20
  • 48.20
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.56e4
  • 1.56e4
  • 1.97e4
47.71
  • 47.71
  • 33.90
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.57e4
  • 1.57e4
47.29
  • 47.29
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
1.58e4
  • 1.58e4
  • 1.68e4
46.96
  • 46.96
  • 43.83
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.61e4
  • 1.61e4
46.20
  • 46.20
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.63e4
  • 1.63e4
45.38
  • 45.38
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.65e4
  • 1.65e4
44.63
  • 44.63
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.74e4
  • 1.74e4
41.61
  • 41.61
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.76e4
  • 1.76e4
41.08
  • 41.08
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.91e4
  • 1.91e4
36.13
  • 36.13
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.93e4
  • 1.93e4
35.21
  • 35.21
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Vertebrata1 geneCompare expression

Paralogy information comes from OMA : ENSDARG00000062199.

Cross-references

EnsemblENSDARG00000062199 (si:dkey-217l24.1)
ZFINZDB-GENE-131121-4 (si:dkey-217l24.1)
EMBLCR788297
Uniprot/SPTREMBLE7F5N8, E7F5N8_DANRE

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