D. rerio Gene: prrt1 - ENSDARG00000062208 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000062208
Nameprrt1
Descriptionproline-rich transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-060503-686]
OrganismDanio rerio (zebrafish)
Synonym(s)dspd1, si:ch211-222e23.4

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
1.66e3
  • 1.66e3
94.45
  • 94.45
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
3.07e3
  • 3.07e3
89.74
  • 89.74
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
4.30e3
  • 4.30e3
  • 8.32e3
  • 1.25e4
  • 1.54e4
  • 1.74e4
85.60
  • 85.60
  • 72.15
  • 58.13
  • 48.30
  • 41.71
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
5.80e3
  • 5.80e3
  • 8.26e3
80.59
  • 80.59
  • 72.34
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
9.58e3
  • 9.58e3
  • 1.24e4
67.92
  • 67.92
  • 58.52
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.62e4
  • 1.62e4
45.64
  • 45.64
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.73e4
  • 1.73e4
41.98
  • 41.98
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.73e4
  • 1.73e4
  • 2.15e4
41.96
  • 41.96
  • 27.85
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.97e4
  • 1.97e4
34.04
  • 34.04
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.40e4
  • 2.40e4
19.67
  • 19.67
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

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