D. rerio Gene: nfs1 - ENSDARG00000062237 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000062237
Namenfs1
DescriptionNFS1 cysteine desulfurase [Source:ZFIN;Acc:ZDB-GENE-060405-1]
OrganismDanio rerio (zebrafish)
Synonym(s)fb50g03, wu:fb50g03
Orthologs(s)24 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000066fully formed stage
656
  • 656
97.81
  • 97.81
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
838
  • 838
97.20
  • 97.20
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000036Larval:Day 4
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
1.02e3
  • 1.02e3
  • 4.55e3
  • 6.25e3
  • 6.86e3
  • 6.88e3
  • 7.66e3
  • 8.13e3
  • 8.24e3
  • 8.73e3
  • 8.87e3
  • 9.17e3
  • 9.35e3
  • 1.01e4
  • 1.03e4
  • 1.34e4
  • 1.44e4
  • 1.47e4
96.58
  • 96.58
  • 84.77
  • 79.09
  • 77.02
  • 76.97
  • 74.34
  • 72.76
  • 72.42
  • 70.77
  • 70.29
  • 69.31
  • 68.68
  • 66.26
  • 65.61
  • 55.05
  • 51.82
  • 50.90
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
1.14e3
  • 1.14e3
  • 1.24e3
  • 1.40e3
  • 4.81e3
  • 5.14e3
96.20
  • 96.20
  • 95.86
  • 95.33
  • 83.88
  • 82.80
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.54e3
  • 1.54e3
94.86
  • 94.86
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.62e3
  • 1.62e3
94.57
  • 94.57
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.76e3
  • 1.76e3
94.10
  • 94.10
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
  • ZFS:0000035Larval:Protruding-mouth
1.97e3
  • 1.97e3
  • 2.85e3
  • 1.21e4
93.42
  • 93.42
  • 90.45
  • 59.59
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
2.00e3
  • 2.00e3
  • 7.36e3
  • 8.39e3
  • 9.15e3
93.29
  • 93.29
  • 75.35
  • 71.92
  • 69.37
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
2.17e3
  • 2.17e3
92.75
  • 92.75
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
2.68e3
  • 2.68e3
91.03
  • 91.03
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
3.27e3
  • 3.27e3
  • 6.67e3
89.05
  • 89.05
  • 77.66
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
3.64e3
  • 3.64e3
87.81
  • 87.81
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
3.71e3
  • 3.71e3
87.57
  • 87.57
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
3.78e3
  • 3.78e3
87.36
  • 87.36
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
3.78e3
  • 3.78e3
87.34
  • 87.34
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
4.00e3
  • 4.00e3
86.61
  • 86.61
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
4.14e3
  • 4.14e3
86.13
  • 86.13
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
4.15e3
  • 4.15e3
86.12
  • 86.12
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000104life cycle
4.20e3
  • 4.20e3
  • 7.35e3
  • 1.45e4
85.94
  • 85.94
  • 75.39
  • 51.33
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
4.34e3
  • 4.34e3
85.48
  • 85.48
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
4.66e3
  • 4.66e3
84.39
  • 84.39
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
4.87e3
  • 4.87e3
  • 8.10e3
83.70
  • 83.70
  • 72.86
AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
5.54e3
  • 5.54e3
81.46
  • 81.46
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:0000068embryo stage
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
5.62e3
  • 5.62e3
  • 5.67e3
  • 5.70e3
  • 6.08e3
  • 6.23e3
  • 6.29e3
  • 6.61e3
  • 7.43e3
  • 8.73e3
  • 9.05e3
81.19
  • 81.19
  • 81.01
  • 80.91
  • 79.64
  • 79.14
  • 78.95
  • 77.88
  • 75.12
  • 70.78
  • 69.69
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
6.04e3
  • 6.04e3
  • 6.19e3
  • 6.76e3
79.79
  • 79.79
  • 79.26
  • 77.36
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
6.20e3
  • 6.20e3
79.23
  • 79.23
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
6.62e3
  • 6.62e3
77.84
  • 77.84
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
6.72e3
  • 6.72e3
77.50
  • 77.50
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
6.98e3
  • 6.98e3
76.63
  • 76.63
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000109gastrula stage
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
7.39e3
  • 7.39e3
  • 7.55e3
  • 9.12e3
  • 9.17e3
  • 9.40e3
  • 1.00e4
75.24
  • 75.24
  • 74.73
  • 69.45
  • 69.29
  • 68.53
  • 66.35
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
9.32e3
  • 9.32e3
68.81
  • 68.81
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi17 species17 genesCompare expression
Bilateria24 species24 genesCompare expression

Orthology information comes from OMA : ENSDARG00000062237.

Cross-references

EnsemblENSDARG00000062237 (nfs1)
ZFINZDB-GENE-060405-1 (nfs1)
EMBLBC134974, BX001056
Uniprot/SPTREMBLQ1LYQ9, Q1LYQ9_DANRE

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