D. rerio Gene: soat1 - ENSDARG00000062297 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000062297
Namesoat1
Descriptionsterol O-acyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-081105-177]
OrganismDanio rerio (zebrafish)
Synonym(s)si:dkey-21p1.4
Orthologs(s)27 orthologs
Paralog(s)3 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.14e3
  • 2.14e3
92.83
  • 92.83
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
3.72e3
  • 3.72e3
87.54
  • 87.54
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
6.21e3
  • 6.21e3
79.20
  • 79.20
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.02e4
  • 1.02e4
65.86
  • 65.86
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.02e4
  • 1.02e4
65.82
  • 65.82
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.09e4
  • 1.09e4
63.60
  • 63.60
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
1.18e4
  • 1.18e4
60.40
  • 60.40
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.19e4
  • 1.19e4
60.32
  • 60.32
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
1.25e4
  • 1.25e4
  • 1.52e4
58.13
  • 58.13
  • 49.22
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.26e4
  • 1.26e4
57.97
  • 57.97
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
1.28e4
  • 1.28e4
  • 1.54e4
  • 1.82e4
  • 1.85e4
57.18
  • 57.18
  • 48.60
  • 38.96
  • 38.11
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.49e4
  • 1.49e4
  • 1.97e4
50.15
  • 50.15
  • 33.95
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.52e4
  • 1.52e4
49.20
  • 49.20
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.63e4
  • 1.63e4
45.38
  • 45.38
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
1.64e4
  • 1.64e4
45.18
  • 45.18
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.70e4
  • 1.70e4
43.05
  • 43.05
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.72e4
  • 1.72e4
42.49
  • 42.49
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.80e4
  • 1.80e4
39.74
  • 39.74
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.82e4
  • 1.82e4
38.99
  • 38.99
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.89e4
  • 1.89e4
  • 2.17e4
36.81
  • 36.81
  • 27.42
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.91e4
  • 1.91e4
36.18
  • 36.18
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
2.09e4
  • 2.09e4
29.87
  • 29.87
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi19 species21 genesCompare expression
Bilateria25 species27 genesCompare expression

Orthology information comes from OMA : ENSDARG00000062297.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Bilateria1 geneCompare expression
Eukaryota3 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000062297.

Cross-references

EnsemblENSDARG00000062297 (soat1)
ZFINZDB-GENE-081105-177 (soat1)
EMBLCR450721, CR450798
Uniprot/SPTREMBLB0UYE4, B0UYE4_DANRE

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