D. rerio Gene: si:dkey-103g5.3 - ENSDARG00000062319 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000062319
Namesi:dkey-103g5.3
Descriptionsi:dkey-103g5.3 [Source:ZFIN;Acc:ZDB-GENE-131127-337]
OrganismDanio rerio (zebrafish)
Synonym(s)unm_sa1276
Orthologs(s)1 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
5.23e3
  • 5.23e3
  • 1.87e4
82.49
  • 82.49
  • 37.25
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
6.38e3
  • 6.38e3
  • 1.30e4
  • 2.01e4
78.62
  • 78.62
  • 56.55
  • 32.74
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
6.90e3
  • 6.90e3
76.91
  • 76.91
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.14e4
  • 1.14e4
  • 1.67e4
61.91
  • 61.91
  • 44.16
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
1.32e4
  • 1.32e4
55.77
  • 55.77
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.00e4
  • 2.00e4
33.01
  • 33.01
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi1 species1 geneCompare expression

Orthology information comes from OMA : ENSDARG00000062319.

Cross-references

EnsemblENSDARG00000062319 (si:dkey-103g5.3)
ZFINZDB-GENE-131127-337 (si:dkey-103g5.3)
EMBLBX572077
Uniprot/SPTREMBLE7F274, E7F274_DANRE

Do not show this banner again