D. rerio Gene: shank2 - ENSDARG00000062325 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000062325
Nameshank2
DescriptionSH3 and multiple ankyrin repeat domains 2 [Source:ZFIN;Acc:ZDB-GENE-061207-58]
OrganismDanio rerio (zebrafish)
Synonym(s)si:dkey-221m4.1
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
2.97e3
  • 2.97e3
90.06
  • 90.06
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
6.92e3
  • 6.92e3
76.84
  • 76.84
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
1.17e4
  • 1.17e4
  • 1.67e4
  • 2.01e4
  • 2.14e4
60.96
  • 60.96
  • 44.09
  • 32.65
  • 28.41
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.18e4
  • 1.18e4
  • 1.43e4
60.38
  • 60.38
  • 52.28
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.29e4
  • 1.29e4
56.73
  • 56.73
AEIR
  • AEIR
UBERON:0000080mesonephros
  • UBERON:0000104life cycle
1.50e4
  • 1.50e4
49.92
  • 49.92
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.64e4
  • 1.64e4
  • 2.00e4
44.98
  • 44.98
  • 33.04
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.72e4
  • 1.72e4
42.44
  • 42.44
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.73e4
  • 1.73e4
42.11
  • 42.11
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.79e4
  • 1.79e4
  • 1.82e4
40.08
  • 40.08
  • 38.92
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.84e4
  • 1.84e4
38.44
  • 38.44
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.93e4
  • 1.93e4
35.50
  • 35.50
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.00e4
  • 2.00e4
32.89
  • 32.89
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.29e4
  • 2.29e4
23.35
  • 23.35
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.34e4
  • 2.34e4
21.71
  • 21.71
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Vertebrata1 geneCompare expression

Paralogy information comes from OMA : ENSDARG00000062325.

Cross-references

EnsemblENSDARG00000062325 (shank2)
ZFINZDB-GENE-061207-58 (shank2)
EMBLAL929309, BX005373, CR382374
Uniprot/SPTREMBLA2AV32, A2AV32_DANRE

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