D. rerio Gene: zgc:158409 - ENSDARG00000062326 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000062326
Namezgc:158409
Descriptionzgc:158409 [Source:ZFIN;Acc:ZDB-GENE-061215-23]
OrganismDanio rerio (zebrafish)
Synonym(s)fb74a08, wu:fb74a08
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
184
  • 184
  • 766
99.39
  • 99.39
  • 97.44
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
200
  • 200
99.33
  • 99.33
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
213
  • 213
  • 232
  • 299
  • 330
  • 338
  • 387
  • 410
  • 421
  • 732
  • 1.22e3
99.29
  • 99.29
  • 99.23
  • 99.00
  • 98.90
  • 98.87
  • 98.71
  • 98.63
  • 98.59
  • 97.55
  • 95.90
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000020Gastrula:75%-epiboly
230
  • 230
  • 250
  • 349
  • 377
  • 435
  • 819
99.23
  • 99.23
  • 99.17
  • 98.83
  • 98.74
  • 98.55
  • 97.26
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
279
  • 279
99.07
  • 99.07
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
353
  • 353
98.82
  • 98.82
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000036Larval:Day 4
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000040Larval:Days 14-20
  • UBERON:0000068embryo stage
  • UBERON:0000106zygote stage
  • UBERON:0000066fully formed stage
  • ZFS:0000049segmentation
  • UBERON:0000104life cycle
355
  • 355
  • 357
  • 429
  • 495
  • 526
  • 606
  • 614
  • 617
  • 748
  • 752
  • 877
  • 1.03e3
  • 1.15e3
  • 6.05e3
  • 6.16e3
  • 1.38e4
  • 1.40e4
  • 1.44e4
98.81
  • 98.81
  • 98.81
  • 98.57
  • 98.34
  • 98.24
  • 97.97
  • 97.95
  • 97.94
  • 97.50
  • 97.49
  • 97.07
  • 96.55
  • 96.14
  • 79.76
  • 79.37
  • 53.74
  • 53.08
  • 51.88
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
375
  • 375
98.75
  • 98.75
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
376
  • 376
  • 577
  • 1.50e3
  • 4.36e3
  • 4.60e3
98.74
  • 98.74
  • 98.07
  • 94.99
  • 85.41
  • 84.60
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
  • ZFS:0000035Larval:Protruding-mouth
396
  • 396
  • 763
  • 1.09e4
98.68
  • 98.68
  • 97.45
  • 63.44
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
415
  • 415
98.61
  • 98.61
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
427
  • 427
  • 992
  • 1.10e3
  • 4.97e3
98.57
  • 98.57
  • 96.68
  • 96.32
  • 83.37
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
436
  • 436
98.54
  • 98.54
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
504
  • 504
  • 607
  • 811
98.32
  • 98.32
  • 97.97
  • 97.29
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
533
  • 533
  • 573
  • 8.72e3
98.22
  • 98.22
  • 98.09
  • 70.80
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
545
  • 545
98.18
  • 98.18
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
554
  • 554
  • 1.50e4
98.15
  • 98.15
  • 49.92
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
637
  • 637
97.87
  • 97.87
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
689
  • 689
97.69
  • 97.69
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
731
  • 731
97.56
  • 97.56
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
737
  • 737
97.54
  • 97.54
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
740
  • 740
97.53
  • 97.53
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
768
  • 768
97.43
  • 97.43
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
834
  • 834
97.21
  • 97.21
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
887
  • 887
97.03
  • 97.03
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.38e3
  • 1.38e3
95.38
  • 95.38
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.43e3
  • 1.43e3
95.22
  • 95.22
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
1.63e3
  • 1.63e3
  • 2.60e3
94.54
  • 94.54
  • 91.31
AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
2.51e3
  • 2.51e3
91.61
  • 91.61
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
3.36e3
  • 3.36e3
88.77
  • 88.77
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
3.55e3
  • 3.55e3
88.11
  • 88.11
AEIR
  • AEIR
UBERON:0001846internal ear
  • UBERON:0000068embryo stage
5.26e3
  • 5.26e3
82.38
  • 82.38
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000066fully formed stage
5.71e3
  • 5.71e3
  • 1.46e4
80.88
  • 80.88
  • 51.26
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
6.99e3
  • 6.99e3
76.60
  • 76.60
AEIR
  • AEIR
UBERON:0001997olfactory epithelium
  • UBERON:0000104life cycle
1.03e4
  • 1.03e4
65.55
  • 65.55
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Clupeocephala1 geneCompare expression

Paralogy information comes from OMA : ENSDARG00000062326.

Cross-references

EnsemblENSDARG00000062326 (zgc:158409)
ZFINZDB-GENE-061215-23 (zgc:158409)
EMBLBC128863, BC153521, CR762398
Uniprot/SPTREMBLA1A5Y7, A1A5Y7_DANRE, E9QI01, E9QI01_DANRE

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