D. rerio Gene: anks1aa - ENSDARG00000062396 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000062396
Nameanks1aa
Descriptionankyrin repeat and sterile alpha motif domain containing 1Aa [Source:ZFIN;Acc:ZDB-GENE-090312-152]
OrganismDanio rerio (zebrafish)
Synonym(s)anks1a, si:ch73-162j3.2

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
2.31e3
  • 2.31e3
  • 5.43e3
  • 8.54e3
  • 1.15e4
  • 1.17e4
92.26
  • 92.26
  • 81.82
  • 71.41
  • 61.41
  • 60.76
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
4.95e3
  • 4.95e3
83.44
  • 83.44
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
5.14e3
  • 5.14e3
82.78
  • 82.78
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
6.22e3
  • 6.22e3
79.17
  • 79.17
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
6.31e3
  • 6.31e3
78.86
  • 78.86
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
6.33e3
  • 6.33e3
  • 7.43e3
78.81
  • 78.81
  • 75.13
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
6.78e3
  • 6.78e3
  • 1.08e4
77.30
  • 77.30
  • 63.67
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
6.89e3
  • 6.89e3
76.93
  • 76.93
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
7.52e3
  • 7.52e3
74.83
  • 74.83
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
8.14e3
  • 8.14e3
72.75
  • 72.75
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
8.98e3
  • 8.98e3
69.94
  • 69.94
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
9.25e3
  • 9.25e3
69.04
  • 69.04
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
9.39e3
  • 9.39e3
68.57
  • 68.57
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
9.45e3
  • 9.45e3
68.37
  • 68.37
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
9.45e3
  • 9.45e3
  • 1.33e4
68.35
  • 68.35
  • 55.45
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
9.89e3
  • 9.89e3
66.90
  • 66.90
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.03e4
  • 1.03e4
65.64
  • 65.64
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.03e4
  • 1.03e4
65.51
  • 65.51
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.04e4
  • 1.04e4
65.14
  • 65.14
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.11e4
  • 1.11e4
62.86
  • 62.86
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.18e4
  • 1.18e4
  • 1.67e4
60.60
  • 60.60
  • 44.11
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.39e4
  • 1.39e4
  • 1.99e4
53.57
  • 53.57
  • 33.22
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.44e4
  • 1.44e4
51.78
  • 51.78
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.68e4
  • 1.68e4
43.76
  • 43.76
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.19e4
  • 2.19e4
26.61
  • 26.61
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

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