D. rerio Gene: pgap1 - ENSDARG00000062465 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000062465
Namepgap1
Descriptionpost-GPI attachment to proteins 1 [Source:ZFIN;Acc:ZDB-GENE-090313-216]
OrganismDanio rerio (zebrafish)
Synonym(s)si:dkey-191g15.7
Orthologs(s)16 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
6.47e3
  • 6.47e3
78.33
  • 78.33
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
7.52e3
  • 7.52e3
  • 9.72e3
74.81
  • 74.81
  • 67.44
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
8.81e3
  • 8.81e3
  • 1.18e4
70.50
  • 70.50
  • 60.65
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
9.67e3
  • 9.67e3
67.61
  • 67.61
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.12e4
  • 1.12e4
62.46
  • 62.46
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.14e4
  • 1.14e4
61.70
  • 61.70
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.20e4
  • 1.20e4
59.95
  • 59.95
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.22e4
  • 1.22e4
59.07
  • 59.07
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.26e4
  • 1.26e4
57.81
  • 57.81
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.28e4
  • 1.28e4
57.11
  • 57.11
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.29e4
  • 1.29e4
56.82
  • 56.82
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.32e4
  • 1.32e4
  • 1.66e4
55.75
  • 55.75
  • 44.27
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.41e4
  • 1.41e4
52.68
  • 52.68
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
1.43e4
  • 1.43e4
  • 1.54e4
  • 1.54e4
  • 1.67e4
  • 1.69e4
51.98
  • 51.98
  • 48.58
  • 48.56
  • 44.18
  • 43.33
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.46e4
  • 1.46e4
50.97
  • 50.97
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.47e4
  • 1.47e4
50.82
  • 50.82
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.47e4
  • 1.47e4
50.68
  • 50.68
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.48e4
  • 1.48e4
50.28
  • 50.28
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.61e4
  • 1.61e4
46.18
  • 46.18
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.62e4
  • 1.62e4
  • 1.84e4
45.66
  • 45.66
  • 38.37
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.63e4
  • 1.63e4
45.41
  • 45.41
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.64e4
  • 1.64e4
44.96
  • 44.96
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.67e4
  • 1.67e4
  • 1.72e4
44.13
  • 44.13
  • 42.44
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.89e4
  • 1.89e4
36.74
  • 36.74
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.05e4
  • 2.05e4
31.34
  • 31.34
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Cross-references

EnsemblENSDARG00000062465 (pgap1)
ZFINZDB-GENE-090313-216 (pgap1)
EMBLCT867952
Uniprot/SPTREMBLE9QJ74, E9QJ74_DANRE, F1R8J0, F1R8J0_DANRE

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