D. rerio Gene: fam21c - ENSDARG00000062532 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000062532
Namefam21c
Descriptionfamily with sequence similarity 21, member C [Source:ZFIN;Acc:ZDB-GENE-060825-87]
OrganismDanio rerio (zebrafish)
Synonym(s)wu:fb78c06, zgc:153646
Orthologs(s)18 orthologs
Paralog(s)50 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.65e3
  • 2.65e3
91.14
  • 91.14
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
2.71e3
  • 2.71e3
90.94
  • 90.94
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
2.96e3
  • 2.96e3
90.08
  • 90.08
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
3.47e3
  • 3.47e3
88.37
  • 88.37
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
3.55e3
  • 3.55e3
88.12
  • 88.12
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
3.61e3
  • 3.61e3
87.92
  • 87.92
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
3.71e3
  • 3.71e3
  • 5.01e3
  • 5.11e3
  • 5.38e3
87.59
  • 87.59
  • 83.22
  • 82.89
  • 81.98
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
3.81e3
  • 3.81e3
87.23
  • 87.23
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
4.01e3
  • 4.01e3
  • 9.31e3
86.57
  • 86.57
  • 68.82
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000030Pharyngula:Prim-15
4.14e3
  • 4.14e3
  • 4.90e3
  • 5.55e3
  • 5.62e3
  • 5.94e3
  • 7.28e3
  • 7.42e3
  • 8.29e3
  • 9.26e3
  • 9.82e3
86.13
  • 86.13
  • 83.58
  • 81.42
  • 81.17
  • 80.12
  • 75.64
  • 75.15
  • 72.26
  • 68.99
  • 67.12
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
4.21e3
  • 4.21e3
85.91
  • 85.91
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
4.27e3
  • 4.27e3
  • 5.65e3
  • 5.69e3
  • 6.56e3
  • 9.05e3
85.71
  • 85.71
  • 81.09
  • 80.94
  • 78.03
  • 69.71
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
4.72e3
  • 4.72e3
84.21
  • 84.21
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
4.90e3
  • 4.90e3
83.58
  • 83.58
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
5.02e3
  • 5.02e3
83.19
  • 83.19
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
5.13e3
  • 5.13e3
82.83
  • 82.83
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000037Larval:Day 5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000106zygote stage
  • UBERON:0000104life cycle
  • UBERON:0000066fully formed stage
  • ZFS:0000049segmentation
  • UBERON:0000068embryo stage
5.37e3
  • 5.37e3
  • 6.51e3
  • 6.92e3
  • 7.57e3
  • 7.63e3
  • 7.84e3
  • 8.05e3
  • 8.05e3
  • 8.56e3
  • 9.37e3
  • 1.00e4
  • 1.02e4
  • 1.06e4
  • 1.16e4
  • 1.41e4
  • 1.45e4
  • 1.45e4
  • 1.50e4
82.01
  • 82.01
  • 78.22
  • 76.82
  • 74.66
  • 74.46
  • 73.75
  • 73.06
  • 73.05
  • 71.35
  • 68.61
  • 66.39
  • 65.90
  • 64.44
  • 61.01
  • 52.86
  • 51.56
  • 51.51
  • 49.80
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
5.41e3
  • 5.41e3
81.88
  • 81.88
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
5.65e3
  • 5.65e3
  • 6.00e3
81.09
  • 81.09
  • 79.93
AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
5.81e3
  • 5.81e3
80.56
  • 80.56
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
5.90e3
  • 5.90e3
80.25
  • 80.25
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
5.97e3
  • 5.97e3
80.00
  • 80.00
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
5.98e3
  • 5.98e3
79.97
  • 79.97
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
6.34e3
  • 6.34e3
78.78
  • 78.78
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
6.63e3
  • 6.63e3
77.82
  • 77.82
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
6.71e3
  • 6.71e3
  • 7.06e3
77.52
  • 77.52
  • 76.37
AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
6.88e3
  • 6.88e3
76.97
  • 76.97
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
7.16e3
  • 7.16e3
  • 7.29e3
  • 8.26e3
76.04
  • 76.04
  • 75.61
  • 72.35
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
7.41e3
  • 7.41e3
75.20
  • 75.20
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000021Gastrula:90%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
7.92e3
  • 7.92e3
  • 9.93e3
  • 1.05e4
  • 1.07e4
  • 1.10e4
  • 1.18e4
73.48
  • 73.48
  • 66.77
  • 64.74
  • 64.07
  • 63.25
  • 60.50
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.01e4
  • 1.01e4
66.27
  • 66.27
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.11e4
  • 1.11e4
62.99
  • 62.99
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Paralogs (same species)

Cross-references

EnsemblENSDARG00000062532 (fam21c)
ZFINZDB-GENE-060825-87 (fam21c)
EMBLCU012047
Uniprot/SPTREMBLB8JKJ1, B8JKJ1_DANRE, B8JKJ2, B8JKJ2_DANRE, B8JKJ4, B8JKJ4_DANRE, F1R5I6, F1R5I6_DANRE

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