D. rerio Gene: bach1a - ENSDARG00000062553 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000062553
Namebach1a
DescriptionBTB and CNC homology 1, basic leucine zipper transcription factor 1 a [Source:ZFIN;Acc:ZDB-GENE-060421-7601]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:136739
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000106zygote stage
  • UBERON:00072322 cell stage
  • ZFS:0000012Blastula:High
  • ZFS:0000024Segmentation:5-9 somites
  • UBERON:0000104life cycle
964
  • 964
  • 4.41e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 7.03e3
  • 1.50e4
96.78
  • 96.78
  • 85.22
  • 77.27
  • 77.27
  • 77.27
  • 76.46
  • 49.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
6.57e3
  • 6.57e3
78.02
  • 78.02
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
6.77e3
  • 6.77e3
77.32
  • 77.32
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
6.95e3
  • 6.95e3
76.74
  • 76.74
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
7.85e3
  • 7.85e3
  • 1.24e4
73.72
  • 73.72
  • 58.36
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
7.91e3
  • 7.91e3
73.53
  • 73.53
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
8.05e3
  • 8.05e3
73.05
  • 73.05
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
8.23e3
  • 8.23e3
72.43
  • 72.43
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
8.44e3
  • 8.44e3
71.73
  • 71.73
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
8.59e3
  • 8.59e3
71.23
  • 71.23
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
8.67e3
  • 8.67e3
  • 1.24e4
70.97
  • 70.97
  • 58.64
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
9.91e3
  • 9.91e3
66.81
  • 66.81
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
9.94e3
  • 9.94e3
66.71
  • 66.71
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000036Larval:Day 4
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
9.96e3
  • 9.96e3
  • 1.12e4
  • 1.12e4
  • 1.12e4
  • 1.25e4
  • 1.26e4
  • 1.49e4
66.67
  • 66.67
  • 62.50
  • 62.50
  • 62.50
  • 58.25
  • 57.77
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.01e4
  • 1.01e4
66.16
  • 66.16
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.01e4
  • 1.01e4
66.07
  • 66.07
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.03e4
  • 1.03e4
65.42
  • 65.42
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
1.04e4
  • 1.04e4
  • 1.12e4
  • 1.41e4
  • 1.44e4
  • 1.59e4
65.11
  • 65.11
  • 62.36
  • 52.83
  • 51.63
  • 46.87
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.16e4
  • 1.16e4
61.09
  • 61.09
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.17e4
  • 1.17e4
60.87
  • 60.87
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.22e4
  • 1.22e4
59.27
  • 59.27
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
1.22e4
  • 1.22e4
  • 1.32e4
59.16
  • 59.16
  • 55.67
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.31e4
  • 1.31e4
  • 1.47e4
56.03
  • 56.03
  • 50.76
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.55e4
  • 1.55e4
48.11
  • 48.11
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.57e4
  • 1.57e4
47.57
  • 47.57
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • EST data: UniGene
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Vertebrata1 geneCompare expression

Paralogy information comes from OMA : ENSDARG00000062553.

Cross-references

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