D. rerio Gene: arhgap35a - ENSDARG00000062577 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000062577
Namearhgap35a
DescriptionRho GTPase activating protein 35a [Source:ZFIN;Acc:ZDB-GENE-120516-2]
OrganismDanio rerio (zebrafish)
Synonym(s)arhgap35, wu:fb33f06
Orthologs(s)25 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
1.59e3
  • 1.59e3
94.69
  • 94.69
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000106zygote stage
  • ZFS:0000019Gastrula:Shield
3.32e3
  • 3.32e3
  • 3.46e3
  • 3.58e3
  • 3.74e3
  • 4.51e3
  • 4.66e3
  • 4.69e3
  • 5.08e3
  • 5.33e3
  • 5.35e3
  • 6.57e3
  • 6.62e3
  • 7.52e3
  • 8.12e3
88.89
  • 88.89
  • 88.40
  • 88.02
  • 87.50
  • 84.91
  • 84.39
  • 84.31
  • 82.99
  • 82.16
  • 82.07
  • 78.01
  • 77.82
  • 74.84
  • 72.80
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • UBERON:0000068embryo stage
  • ZFS:0000024Segmentation:5-9 somites
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • ZFS:0000030Pharyngula:Prim-15
3.55e3
  • 3.55e3
  • 4.31e3
  • 5.06e3
  • 5.45e3
  • 5.59e3
  • 6.15e3
  • 6.31e3
  • 6.39e3
  • 8.04e3
  • 8.74e3
88.11
  • 88.11
  • 85.56
  • 83.06
  • 81.75
  • 81.30
  • 79.39
  • 78.87
  • 78.59
  • 73.07
  • 70.72
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
3.77e3
  • 3.77e3
  • 4.46e3
  • 4.74e3
  • 4.86e3
87.40
  • 87.40
  • 85.06
  • 84.14
  • 83.73
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
3.78e3
  • 3.78e3
  • 3.90e3
87.34
  • 87.34
  • 86.95
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
3.97e3
  • 3.97e3
  • 8.01e3
86.70
  • 86.70
  • 73.17
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
4.59e3
  • 4.59e3
84.63
  • 84.63
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
4.93e3
  • 4.93e3
  • 6.09e3
83.48
  • 83.48
  • 79.60
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000019Gastrula:Shield
4.94e3
  • 4.94e3
  • 5.92e3
  • 6.50e3
  • 7.63e3
  • 7.68e3
  • 9.96e3
83.46
  • 83.46
  • 80.17
  • 78.25
  • 74.47
  • 74.28
  • 66.66
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
4.99e3
  • 4.99e3
83.30
  • 83.30
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
5.22e3
  • 5.22e3
  • 5.76e3
  • 9.42e3
82.53
  • 82.53
  • 80.72
  • 68.46
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
5.77e3
  • 5.77e3
80.69
  • 80.69
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
6.03e3
  • 6.03e3
79.82
  • 79.82
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
6.38e3
  • 6.38e3
78.64
  • 78.64
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
6.40e3
  • 6.40e3
78.58
  • 78.58
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000015Blastula:Dome
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
6.72e3
  • 6.72e3
  • 7.25e3
  • 7.74e3
  • 9.65e3
  • 1.02e4
77.50
  • 77.50
  • 75.73
  • 74.08
  • 67.69
  • 66.01
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
6.89e3
  • 6.89e3
76.93
  • 76.93
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
6.90e3
  • 6.90e3
76.90
  • 76.90
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
7.82e3
  • 7.82e3
73.82
  • 73.82
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
7.89e3
  • 7.89e3
73.60
  • 73.60
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
8.89e3
  • 8.89e3
70.23
  • 70.23
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
9.18e3
  • 9.18e3
69.26
  • 69.26
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
9.80e3
  • 9.80e3
67.20
  • 67.20
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
9.84e3
  • 9.84e3
67.06
  • 67.06
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.03e4
  • 1.03e4
65.55
  • 65.55
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.04e4
  • 1.04e4
65.11
  • 65.11
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.05e4
  • 1.05e4
64.94
  • 64.94
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.10e4
  • 1.10e4
63.20
  • 63.20
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.27e4
  • 1.27e4
57.38
  • 57.38
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.40e4
  • 1.40e4
53.09
  • 53.09
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi18 species18 genesCompare expression
Bilateria25 species25 genesCompare expression

Orthology information comes from OMA : ENSDARG00000062577.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Euteleostomi1 geneCompare expression
Chordata2 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000062577.

Cross-references

EnsemblENSDARG00000062577 (arhgap35a)
ZFINZDB-GENE-120516-2 (arhgap35a)
EMBLCR293508, CT030002
Uniprot/SPTREMBLE7F8G5, E7F8G5_DANRE

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