D. rerio Gene: myl10 - ENSDARG00000062592 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000062592
Namemyl10
Descriptionmyosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
OrganismDanio rerio (zebrafish)
Synonym(s)id:ibd2025, zgc:110679
Paralog(s)49 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
157
  • 157
  • 192
  • 200
  • 219
  • 307
  • 344
  • 469
  • 523
  • 1.06e3
  • 2.26e3
99.48
  • 99.48
  • 99.36
  • 99.33
  • 99.27
  • 98.97
  • 98.85
  • 98.43
  • 98.25
  • 96.47
  • 92.42
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
209
  • 209
  • 286
  • 306
99.30
  • 99.30
  • 99.05
  • 98.98
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
224
  • 224
99.25
  • 99.25
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000036Larval:Day 4
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000037Larval:Day 5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
252
  • 252
  • 267
  • 304
  • 305
  • 334
  • 391
  • 1.07e3
  • 1.26e3
  • 3.29e3
  • 9.11e3
  • 1.21e4
  • 1.31e4
99.16
  • 99.16
  • 99.11
  • 98.99
  • 98.98
  • 98.88
  • 98.69
  • 96.42
  • 95.80
  • 88.98
  • 69.50
  • 59.56
  • 56.03
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
317
  • 317
98.94
  • 98.94
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
354
  • 354
  • 3.94e3
98.82
  • 98.82
  • 86.80
AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
490
  • 490
98.36
  • 98.36
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
706
  • 706
97.64
  • 97.64
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
800
  • 800
97.32
  • 97.32
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
937
  • 937
96.86
  • 96.86
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.12e3
  • 1.12e3
96.27
  • 96.27
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000109gastrula stage
3.79e3
  • 3.79e3
  • 1.12e4
  • 1.28e4
  • 1.38e4
87.32
  • 87.32
  • 62.48
  • 57.18
  • 53.94
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
3.86e3
  • 3.86e3
  • 1.61e4
87.09
  • 87.09
  • 46.06
AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
3.95e3
  • 3.95e3
  • 1.25e4
  • 1.31e4
  • 1.31e4
  • 1.39e4
86.78
  • 86.78
  • 58.30
  • 56.24
  • 56.22
  • 53.41
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
5.02e3
  • 5.02e3
83.19
  • 83.19
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
5.07e3
  • 5.07e3
  • 1.42e4
  • 1.87e4
83.02
  • 83.02
  • 52.60
  • 37.40
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
1.12e4
  • 1.12e4
62.66
  • 62.66
AEIR
  • AEIR
ZFA:0000003adaxial cell (Danio)
  • ZFS:0000026Segmentation:14-19 somites
1.12e4
  • 1.12e4
62.48
  • 62.48
AEIR
  • AEIR
CL:0000189slow muscle cell
  • ZFS:0000035Larval:Protruding-mouth
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.58e4
  • 1.58e4
47.15
  • 47.15
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.72e4
  • 1.72e4
42.28
  • 42.28
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.78e4
  • 1.78e4
40.41
  • 40.41
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.81e4
  • 1.81e4
39.33
  • 39.33
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.84e4
  • 1.84e4
38.31
  • 38.31
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.09e4
  • 2.09e4
29.98
  • 29.98
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Opisthokonta5 genesCompare expression
Eukaryota49 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000062592.

Cross-references

EnsemblENSDARG00000062592 (myl10)
ZFINZDB-GENE-050417-421 (myl10)
EMBLCU914783
Uniprot/SPTREMBLF1QJP3, F1QJP3_DANRE

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