D. rerio Gene: irg1l - ENSDARG00000062788 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000062788
Nameirg1l
Descriptionimmunoresponsive gene 1, like [Source:ZFIN;Acc:ZDB-GENE-061103-301]
OrganismDanio rerio (zebrafish)
Synonym(s)fc49d01, wu:fc49d01, zgc:154020
Orthologs(s)4 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
4.08e3
  • 4.08e3
  • 1.78e4
86.33
  • 86.33
  • 40.46
AEIR
  • AEIR
  • AEIR
UBERON:0001997olfactory epithelium
  • UBERON:0000104life cycle
4.44e3
  • 4.44e3
85.13
  • 85.13
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
5.27e3
  • 5.27e3
82.34
  • 82.34
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
5.95e3
  • 5.95e3
  • 6.43e3
  • 1.37e4
80.06
  • 80.06
  • 78.48
  • 54.02
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000165mouth
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000036Larval:Day 4
7.47e3
  • 7.47e3
  • 1.49e4
75.00
  • 75.00
  • 50.00
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
7.85e3
  • 7.85e3
  • 7.99e3
  • 1.08e4
  • 1.16e4
  • 1.21e4
  • 1.35e4
  • 1.43e4
  • 1.55e4
  • 1.62e4
73.71
  • 73.71
  • 73.24
  • 63.76
  • 61.08
  • 59.37
  • 54.82
  • 52.24
  • 48.00
  • 45.71
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
8.64e3
  • 8.64e3
71.08
  • 71.08
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
8.89e3
  • 8.89e3
70.22
  • 70.22
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.04e4
  • 1.04e4
65.24
  • 65.24
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
1.08e4
  • 1.08e4
  • 1.17e4
63.83
  • 63.83
  • 60.96
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.08e4
  • 1.08e4
63.68
  • 63.68
AEIR
  • AEIR
UBERON:0000162cloaca
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000036Larval:Day 4
1.12e4
  • 1.12e4
  • 1.49e4
62.49
  • 62.49
  • 50.00
AEIR
  • AEIR
  • AEIR
UBERON:0001042chordate pharynx
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000036Larval:Day 4
1.12e4
  • 1.12e4
  • 1.49e4
62.48
  • 62.48
  • 50.00
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.12e4
  • 1.12e4
62.47
  • 62.47
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000040Larval:Days 14-20
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000036Larval:Day 4
  • UBERON:0000068embryo stage
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000037Larval:Day 5
1.13e4
  • 1.13e4
  • 1.19e4
  • 1.27e4
  • 1.28e4
  • 1.48e4
  • 1.61e4
  • 1.78e4
  • 1.79e4
  • 1.80e4
  • 1.83e4
62.30
  • 62.30
  • 60.29
  • 57.62
  • 57.22
  • 50.61
  • 46.00
  • 40.38
  • 40.18
  • 39.85
  • 38.62
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.13e4
  • 1.13e4
62.29
  • 62.29
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
1.21e4
  • 1.21e4
  • 2.12e4
59.59
  • 59.59
  • 28.98
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.23e4
  • 1.23e4
58.90
  • 58.90
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.30e4
  • 1.30e4
56.52
  • 56.52
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.36e4
  • 1.36e4
54.43
  • 54.43
AEIR
  • AEIR
UBERON:0001555digestive tract
  • UBERON:0000066fully formed stage
1.50e4
  • 1.50e4
49.90
  • 49.90
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.64e4
  • 1.64e4
  • 1.84e4
44.95
  • 44.95
  • 38.50
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.81e4
  • 1.81e4
39.38
  • 39.38
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Bilateria1 geneCompare expression

Paralogy information comes from OMA : ENSDARG00000062788.

Cross-references

EnsemblENSDARG00000062788 (irg1l)
ZFINZDB-GENE-061103-301 (irg1l)
EMBLBC125936, CR381540
Uniprot/SPTREMBLA0JMM8, A0JMM8_DANRE

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