Gene: BBOF1 (1 to many) - ENSDARG00000062924 - Danio rerio (zebrafish)

General information

Ensembl ID	ENSDARG00000062924
Name	BBOF1 (1 to many)
Description	si:ch211-243o19.4 [Source:ZFIN;Acc:ZDB-GENE-070424-167]
Organism	Danio rerio (zebrafish)
Synonym(s)	c14orf45, ccdc176, si:dkey-265c15.3
Orthologs(s)	17 orthologs
Paralog(s)	1 paralogs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0000473	testis	[+] 1 stage UBERON:0000066fully formed stage	2.77e3 2.77e3	90.72 90.72	AEIR AEIR
UBERON:0000160	intestine	[+] 1 stage UBERON:0000066fully formed stage	1.35e4 1.35e4	54.79 54.79	AEIR AEIR
UBERON:0000922	embryo	[+] 4 stages UBERON:0000068embryo stage ZFS:0000033Hatching:Long-pec UBERON:0004707pharyngula stage ZFS:0000029Pharyngula:Prim-5	1.64e4 1.64e4 1.89e4 1.93e4 2.11e4	45.04 45.04 36.81 35.32 29.45	AEIR AEIR AEIR AEIR AEIR
UBERON:0002113	kidney	[+] 1 stage UBERON:0000066fully formed stage	1.65e4 1.65e4	44.87 44.87	AEIR AEIR
UBERON:0006860	swim bladder	[+] 1 stage UBERON:0000066fully formed stage	1.82e4 1.82e4	38.90 38.90	AEIR AEIR
UBERON:0000955	brain	[+] 1 stage UBERON:0000066fully formed stage	1.86e4 1.86e4	37.74 37.74	AEIR AEIR
UBERON:0002415	tail	[+] 1 stage UBERON:0000066fully formed stage	1.99e4 1.99e4	33.26 33.26	AEIR AEIR
UBERON:0007132	head kidney	[+] 1 stage UBERON:0000066fully formed stage	2.10e4 2.10e4	29.66 29.66	AEIR AEIR
UBERON:0002548	larva	[+] 1 stage UBERON:0000069larval stage	2.12e4 2.12e4	28.98 28.98	AEIR AEIR
UBERON:0002481	bone tissue	[+] 1 stage UBERON:0000066fully formed stage	2.15e4 2.15e4	27.97 27.97	AEIR AEIR
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000066fully formed stage	2.17e4 2.17e4	27.36 27.36	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Orthologs

Taxon name	Species with orthologs	Gene(s)	Expression comparison	See details
Euteleostomi	17 species Homo sapiens (human) Mus musculus (mouse) Pan troglodytes (chimpanzee) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Rattus norvegicus (rat) Bos taurus (cattle) Sus scrofa (pig) Equus caballus (horse) Oryctolagus cuniculus (rabbit) Canis lupus familiaris (dog) Felis catus (cat) Cavia porcellus (guinea pig) Ornithorhynchus anatinus (platypus) Gallus gallus (chicken) Anolis carolinensis (green anole) Xenopus tropicalis (western clawed frog)	17 genes ENSG00000119636 BBOF1 ENSMUSG00000057265 Bbof1 ENSPTRG00000006530 BBOF1 ENSGGOG00000009049 BBOF1 ENSMMUG00000012683 BBOF1 ENSRNOG00000011376 Ccdc176 ENSBTAG00000018467 BBOF1 ENSSSCG00000002356 BBOF1 ENSECAG00000005420 BBOF1 ENSOCUG00000017487 BBOF1 ENSCAFG00000016891 BBOF1 ENSFCAG00000006200 BBOF1 ENSCPOG00000015588 BBOF1 ENSOANG00000008768 BBOF1 ENSGALG00000010206 BBOF1 ENSACAG00000016293 BBOF1 ENSXETG00000002847 ccdc176	Compare expression	[+]

Orthology information comes from OMA : ENSDARG00000062924.

Paralogs (same species)

Taxon name	Gene(s)	Expression comparison	See details
Otophysi	1 gene ENSDARG00000068855 BBOF1 (1 to many)	Compare expression	[+]

Paralogy information comes from OMA : ENSDARG00000062924.

Cross-references

Ensembl	ENSDARG00000062924 (BBOF1 (1 to many))
HGNC	HGNC:19855 (BBOF1 (1 to many))
ZFIN	ZDB-GENE-070424-167 (si:ch211-243o19.4)
EMBL	BX511084
Uniprot/SPTREMBL	B8A5A2, B8A5A2_DANRE