D. rerio Gene: psd2 - ENSDARG00000063036 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000063036
Namepsd2
Descriptionpleckstrin and Sec7 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3033]
OrganismDanio rerio (zebrafish)
Synonym(s)fc25d04, si: dkey-29k15.1, wu:fc25d04

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0000066fully formed stage
3.49e3
  • 3.49e3
88.31
  • 88.31
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
5.31e3
  • 5.31e3
82.21
  • 82.21
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
6.96e3
  • 6.96e3
  • 9.47e3
  • 1.09e4
  • 1.27e4
  • 1.29e4
76.69
  • 76.69
  • 68.28
  • 63.58
  • 57.56
  • 56.89
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
7.00e3
  • 7.00e3
  • 9.43e3
76.57
  • 76.57
  • 68.41
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
7.51e3
  • 7.51e3
  • 1.38e4
74.84
  • 74.84
  • 53.88
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
8.56e3
  • 8.56e3
71.33
  • 71.33
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
9.00e3
  • 9.00e3
69.86
  • 69.86
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
9.22e3
  • 9.22e3
69.13
  • 69.13
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.06e4
  • 1.06e4
  • 1.21e4
64.50
  • 64.50
  • 59.58
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.08e4
  • 1.08e4
63.80
  • 63.80
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.10e4
  • 1.10e4
63.12
  • 63.12
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.45e4
  • 1.45e4
51.35
  • 51.35
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.50e4
  • 1.50e4
49.80
  • 49.80
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.54e4
  • 1.54e4
48.34
  • 48.34
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.57e4
  • 1.57e4
47.36
  • 47.36
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.62e4
  • 1.62e4
45.91
  • 45.91
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.63e4
  • 1.63e4
45.31
  • 45.31
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.72e4
  • 1.72e4
42.57
  • 42.57
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.82e4
  • 1.82e4
39.20
  • 39.20
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.96e4
  • 1.96e4
34.36
  • 34.36
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

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