D. rerio Gene: tulp4b - ENSDARG00000063056 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000063056
Nametulp4b
Descriptiontubby like protein 4b [Source:ZFIN;Acc:ZDB-GENE-130530-708]
OrganismDanio rerio (zebrafish)
Synonym(s)zmp:0000000705

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
2.94e3
  • 2.94e3
  • 1.67e4
90.16
  • 90.16
  • 44.21
AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000040Larval:Days 14-20
  • UBERON:0000106zygote stage
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
3.70e3
  • 3.70e3
  • 8.94e3
  • 9.52e3
  • 1.30e4
  • 1.39e4
  • 1.48e4
  • 1.61e4
  • 1.62e4
87.60
  • 87.60
  • 70.07
  • 68.11
  • 56.45
  • 53.36
  • 50.43
  • 46.02
  • 45.90
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
6.80e3
  • 6.80e3
  • 9.97e3
  • 1.09e4
77.23
  • 77.23
  • 66.61
  • 63.38
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
6.83e3
  • 6.83e3
  • 1.06e4
77.14
  • 77.14
  • 64.54
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
7.10e3
  • 7.10e3
  • 1.26e4
  • 1.34e4
  • 1.98e4
  • 2.17e4
  • 2.19e4
76.22
  • 76.22
  • 57.85
  • 55.04
  • 33.78
  • 27.43
  • 26.66
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
8.83e3
  • 8.83e3
  • 1.33e4
  • 1.49e4
70.43
  • 70.43
  • 55.31
  • 50.20
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
9.84e3
  • 9.84e3
67.05
  • 67.05
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.28e4
  • 1.28e4
57.03
  • 57.03
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.37e4
  • 1.37e4
54.19
  • 54.19
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.38e4
  • 1.38e4
  • 1.62e4
53.77
  • 53.77
  • 45.64
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.59e4
  • 1.59e4
46.88
  • 46.88
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.74e4
  • 1.74e4
41.86
  • 41.86
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.77e4
  • 1.77e4
40.77
  • 40.77
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.83e4
  • 1.83e4
38.74
  • 38.74
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.01e4
  • 2.01e4
32.80
  • 32.80
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
2.02e4
  • 2.02e4
32.24
  • 32.24
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
2.03e4
  • 2.03e4
31.96
  • 31.96
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.09e4
  • 2.09e4
30.12
  • 30.12
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EnsemblENSDARG00000063056 (tulp4b)
ZFINZDB-GENE-130530-708 (tulp4b)
EMBLCR407704
Uniprot/SPTREMBLE7EZ31, E7EZ31_DANRE, X1WHL1, X1WHL1_DANRE

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