D. rerio Gene: nrxn2b - ENSDARG00000063150 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000063150
Namenrxn2b
Descriptionneurexin 2b [Source:ZFIN;Acc:ZDB-GENE-070206-7]
OrganismDanio rerio (zebrafish)
Synonym(s)nrxn2ba, nrxn2bb
Orthologs(s)2 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000066fully formed stage
4.66e3
  • 4.66e3
84.39
  • 84.39
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
5.68e3
  • 5.68e3
  • 1.31e4
80.97
  • 80.97
  • 56.09
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
7.63e3
  • 7.63e3
  • 9.83e3
  • 1.57e4
  • 1.73e4
  • 1.86e4
74.44
  • 74.44
  • 67.07
  • 47.46
  • 42.11
  • 37.68
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
1.04e4
  • 1.04e4
65.30
  • 65.30
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.05e4
  • 1.05e4
64.95
  • 64.95
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.24e4
  • 1.24e4
  • 1.59e4
58.54
  • 58.54
  • 46.76
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.38e4
  • 1.38e4
53.88
  • 53.88
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.49e4
  • 1.49e4
50.13
  • 50.13
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.52e4
  • 1.52e4
49.25
  • 49.25
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.52e4
  • 1.52e4
49.09
  • 49.09
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.61e4
  • 1.61e4
46.14
  • 46.14
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.74e4
  • 1.74e4
  • 1.75e4
41.68
  • 41.68
  • 41.45
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.89e4
  • 1.89e4
36.81
  • 36.81
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.92e4
  • 1.92e4
35.73
  • 35.73
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.93e4
  • 1.93e4
35.25
  • 35.25
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.02e4
  • 2.02e4
32.24
  • 32.24
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.04e4
  • 2.04e4
31.62
  • 31.62
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
2.04e4
  • 2.04e4
31.60
  • 31.60
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.05e4
  • 2.05e4
31.46
  • 31.46
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi2 species2 genesCompare expression

Orthology information comes from OMA : ENSDARG00000063150.

Cross-references

EnsemblENSDARG00000063150 (nrxn2b)
ZFINZDB-GENE-070206-7 (nrxn2b)
EMBLCABZ01078038, CABZ01078039, CABZ01078040, CABZ01078041, CABZ01078042, CABZ01078043, CABZ01078044, DQ641431
Uniprot/SPTREMBLA1XQX7, A1XQX7_DANRE

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