D. rerio Gene: cmtm8b - ENSDARG00000063162 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000063162
Namecmtm8b
DescriptionCKLF-like MARVEL transmembrane domain containing 8b [Source:ZFIN;Acc:ZDB-GENE-070112-1312]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:158657
Orthologs(s)16 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
1.89e3
  • 1.89e3
  • 2.60e3
  • 3.42e3
93.69
  • 93.69
  • 91.30
  • 88.56
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
3.76e3
  • 3.76e3
  • 1.29e4
  • 1.30e4
  • 1.38e4
  • 1.51e4
  • 1.75e4
  • 1.93e4
  • 2.06e4
  • 2.37e4
  • 2.41e4
87.42
  • 87.42
  • 56.68
  • 56.51
  • 53.70
  • 49.42
  • 41.46
  • 35.46
  • 31.02
  • 20.62
  • 19.29
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000036Larval:Day 4
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000104life cycle
4.83e3
  • 4.83e3
  • 7.56e3
  • 8.21e3
  • 9.90e3
  • 1.12e4
  • 1.19e4
  • 1.32e4
  • 1.34e4
  • 1.43e4
  • 1.47e4
  • 1.50e4
83.84
  • 83.84
  • 74.69
  • 72.52
  • 66.86
  • 62.47
  • 60.00
  • 55.64
  • 55.24
  • 52.23
  • 50.64
  • 49.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
7.91e3
  • 7.91e3
  • 1.17e4
  • 1.89e4
73.52
  • 73.52
  • 60.66
  • 36.80
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
8.37e3
  • 8.37e3
  • 1.74e4
71.98
  • 71.98
  • 41.79
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.16e4
  • 1.16e4
61.30
  • 61.30
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.18e4
  • 1.18e4
60.52
  • 60.52
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.22e4
  • 1.22e4
59.05
  • 59.05
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
1.24e4
  • 1.24e4
  • 1.58e4
58.40
  • 58.40
  • 47.00
AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.34e4
  • 1.34e4
54.97
  • 54.97
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.38e4
  • 1.38e4
  • 1.52e4
53.73
  • 53.73
  • 49.17
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.46e4
  • 1.46e4
51.21
  • 51.21
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.64e4
  • 1.64e4
45.25
  • 45.25
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.77e4
  • 1.77e4
40.77
  • 40.77
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.79e4
  • 1.79e4
39.94
  • 39.94
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.80e4
  • 1.80e4
39.88
  • 39.88
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.84e4
  • 1.84e4
38.55
  • 38.55
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.85e4
  • 1.85e4
38.09
  • 38.09
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.97e4
  • 1.97e4
34.05
  • 34.05
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
2.06e4
  • 2.06e4
31.18
  • 31.18
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.06e4
  • 2.06e4
31.17
  • 31.17
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.12e4
  • 2.12e4
29.13
  • 29.13
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.25e4
  • 2.25e4
24.70
  • 24.70
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Chordata2 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000063162.

Cross-references

EnsemblENSDARG00000063162 (cmtm8b)
ZFINZDB-GENE-070112-1312 (cmtm8b)
EMBLAL935025
Uniprot/SPTREMBLF1QF66, F1QF66_DANRE

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