D. rerio Gene: chkb - ENSDARG00000063167 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000063167
Namechkb
Descriptioncholine kinase beta [Source:ZFIN;Acc:ZDB-GENE-030131-2928]
OrganismDanio rerio (zebrafish)
Synonym(s)fc21g05, si:ch211-218c17.2, wu:fc21g05
Paralog(s)4 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.34e3
  • 2.34e3
92.18
  • 92.18
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
2.88e3
  • 2.88e3
90.36
  • 90.36
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.89e3
  • 2.89e3
90.32
  • 90.32
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
3.12e3
  • 3.12e3
  • 4.69e3
  • 5.79e3
  • 9.38e3
89.56
  • 89.56
  • 84.29
  • 80.62
  • 68.60
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
3.94e3
  • 3.94e3
86.80
  • 86.80
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
4.32e3
  • 4.32e3
85.54
  • 85.54
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
4.39e3
  • 4.39e3
85.31
  • 85.31
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
4.87e3
  • 4.87e3
  • 5.69e3
83.71
  • 83.71
  • 80.94
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
4.89e3
  • 4.89e3
  • 7.52e3
83.63
  • 83.63
  • 74.83
AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000023Segmentation:1-4 somites
  • UBERON:0004707pharyngula stage
  • UBERON:00072322 cell stage
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • ZFS:0000006Cleavage:32-cell
  • ZFS:0000007Cleavage:64-cell
  • ZFS:0000008Blastula:128-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000010Blastula:512-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000012Blastula:High
  • ZFS:0000013Blastula:Oblong
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000040Larval:Days 14-20
  • UBERON:0000106zygote stage
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000037Larval:Day 5
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000036Larval:Day 4
  • ZFS:0000019Gastrula:Shield
4.98e3
  • 4.98e3
  • 6.54e3
  • 6.64e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.97e3
  • 7.03e3
  • 7.26e3
  • 7.40e3
  • 7.47e3
  • 7.47e3
  • 7.91e3
  • 8.60e3
  • 8.94e3
  • 8.96e3
  • 8.96e3
  • 9.31e3
  • 9.41e3
  • 9.77e3
  • 9.84e3
  • 1.00e4
  • 1.01e4
  • 1.01e4
  • 1.01e4
  • 1.08e4
  • 1.15e4
83.33
  • 83.33
  • 78.12
  • 77.77
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 76.66
  • 76.46
  • 75.70
  • 75.22
  • 74.99
  • 74.99
  • 73.52
  • 71.20
  • 70.07
  • 69.99
  • 69.99
  • 68.84
  • 68.49
  • 67.29
  • 67.06
  • 66.42
  • 66.23
  • 66.13
  • 66.10
  • 63.80
  • 61.35
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
5.26e3
  • 5.26e3
  • 9.50e3
82.39
  • 82.39
  • 68.21
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
5.32e3
  • 5.32e3
82.19
  • 82.19
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
5.37e3
  • 5.37e3
82.03
  • 82.03
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
5.50e3
  • 5.50e3
81.58
  • 81.58
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
5.59e3
  • 5.59e3
  • 5.71e3
  • 8.99e3
  • 9.59e3
  • 1.34e4
81.30
  • 81.30
  • 80.87
  • 69.89
  • 67.91
  • 54.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
5.81e3
  • 5.81e3
80.56
  • 80.56
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000024Segmentation:5-9 somites
6.27e3
  • 6.27e3
  • 7.10e3
  • 7.47e3
  • 7.66e3
  • 8.58e3
  • 8.86e3
  • 1.00e4
  • 1.04e4
  • 1.13e4
  • 1.13e4
79.00
  • 79.00
  • 76.24
  • 75.00
  • 74.34
  • 71.26
  • 70.32
  • 66.52
  • 65.09
  • 62.14
  • 62.03
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
6.31e3
  • 6.31e3
78.89
  • 78.89
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
6.46e3
  • 6.46e3
78.37
  • 78.37
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
6.61e3
  • 6.61e3
77.88
  • 77.88
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
7.01e3
  • 7.01e3
76.54
  • 76.54
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
7.04e3
  • 7.04e3
76.42
  • 76.42
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
7.23e3
  • 7.23e3
75.79
  • 75.79
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
7.28e3
  • 7.28e3
75.62
  • 75.62
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
8.28e3
  • 8.28e3
72.26
  • 72.26
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
8.40e3
  • 8.40e3
71.87
  • 71.87
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
8.55e3
  • 8.55e3
71.36
  • 71.36
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000109gastrula stage
9.32e3
  • 9.32e3
  • 9.34e3
  • 1.01e4
  • 1.07e4
  • 1.17e4
  • 1.43e4
68.80
  • 68.80
  • 68.74
  • 66.26
  • 64.27
  • 60.76
  • 52.08
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
9.64e3
  • 9.64e3
67.73
  • 67.73
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
9.90e3
  • 9.90e3
  • 1.08e4
66.86
  • 66.86
  • 63.75
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
1.02e4
  • 1.02e4
  • 1.11e4
  • 1.14e4
65.86
  • 65.86
  • 62.81
  • 61.70
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.16e4
  • 1.16e4
61.02
  • 61.02
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression
Eukaryota4 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000063167.

Cross-references

EnsemblENSDARG00000063167 (chkb)
ZFINZDB-GENE-030131-2928 (chkb)
EMBLBC163504, BC163518, BX276107, CR936412
Uniprot/SPTREMBLQ1LXT9, Q1LXT9_DANRE

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