D. rerio Gene: mrpl9 - ENSDARG00000063249 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000063249
Namemrpl9
Descriptionmitochondrial ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-070717-4]
OrganismDanio rerio (zebrafish)
Synonym(s)im:6902315, si:ch211-210h11.9, wu:fa98b03
Orthologs(s)12 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
4.55e3
  • 4.55e3
84.78
  • 84.78
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
4.58e3
  • 4.58e3
84.66
  • 84.66
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
  • UBERON:0000068embryo stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
4.76e3
  • 4.76e3
  • 5.40e3
  • 5.86e3
  • 5.97e3
  • 6.06e3
  • 6.22e3
  • 7.60e3
  • 8.24e3
  • 9.30e3
  • 1.00e4
84.06
  • 84.06
  • 81.92
  • 80.38
  • 80.01
  • 79.70
  • 79.17
  • 74.56
  • 72.42
  • 68.85
  • 66.39
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
4.78e3
  • 4.78e3
83.98
  • 83.98
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
5.14e3
  • 5.14e3
  • 6.28e3
82.79
  • 82.79
  • 78.96
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
5.17e3
  • 5.17e3
82.69
  • 82.69
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • UBERON:0000109gastrula stage
5.47e3
  • 5.47e3
  • 6.50e3
  • 7.44e3
  • 7.57e3
  • 9.63e3
  • 1.05e4
81.69
  • 81.69
  • 78.22
  • 75.09
  • 74.64
  • 67.74
  • 64.91
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
5.48e3
  • 5.48e3
81.66
  • 81.66
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
5.57e3
  • 5.57e3
81.34
  • 81.34
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
5.63e3
  • 5.63e3
81.14
  • 81.14
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
5.69e3
  • 5.69e3
  • 5.88e3
  • 6.25e3
  • 7.59e3
  • 9.31e3
80.94
  • 80.94
  • 80.30
  • 79.07
  • 74.58
  • 68.84
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
5.89e3
  • 5.89e3
  • 5.98e3
  • 9.90e3
  • 1.13e4
80.27
  • 80.27
  • 79.97
  • 66.86
  • 62.03
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000036Larval:Day 4
  • ZFS:0000042Juvenile:Days 30-44
  • UBERON:0000106zygote stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000037Larval:Day 5
6.07e3
  • 6.07e3
  • 6.89e3
  • 6.91e3
  • 6.93e3
  • 7.07e3
  • 7.32e3
  • 7.45e3
  • 7.95e3
  • 8.14e3
  • 8.18e3
  • 8.32e3
  • 8.60e3
  • 9.22e3
  • 1.22e4
79.69
  • 79.69
  • 76.94
  • 76.87
  • 76.80
  • 76.33
  • 75.50
  • 75.07
  • 73.38
  • 72.74
  • 72.60
  • 72.13
  • 71.19
  • 69.12
  • 59.09
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
6.20e3
  • 6.20e3
79.24
  • 79.24
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
6.23e3
  • 6.23e3
  • 6.76e3
  • 7.10e3
79.14
  • 79.14
  • 77.37
  • 76.24
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • UBERON:00072322 cell stage
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000018Gastrula:Germ-ring
  • UBERON:0000106zygote stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000006Cleavage:32-cell
  • ZFS:0000007Cleavage:64-cell
  • ZFS:0000008Blastula:128-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000010Blastula:512-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000012Blastula:High
  • ZFS:0000013Blastula:Oblong
  • ZFS:0000015Blastula:Dome
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000026Segmentation:14-19 somites
6.40e3
  • 6.40e3
  • 6.40e3
  • 6.40e3
  • 6.64e3
  • 6.89e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.97e3
  • 8.53e3
  • 8.54e3
  • 8.71e3
  • 8.79e3
  • 8.79e3
  • 8.96e3
  • 8.96e3
  • 9.13e3
  • 9.13e3
  • 9.13e3
  • 9.71e3
  • 9.96e3
  • 9.96e3
78.57
  • 78.57
  • 78.57
  • 78.57
  • 77.77
  • 76.92
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 73.32
  • 71.43
  • 71.41
  • 70.82
  • 70.57
  • 70.57
  • 69.99
  • 69.98
  • 69.43
  • 69.43
  • 69.43
  • 67.48
  • 66.66
  • 66.65
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
6.45e3
  • 6.45e3
78.39
  • 78.39
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
6.64e3
  • 6.64e3
77.79
  • 77.79
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
6.78e3
  • 6.78e3
77.28
  • 77.28
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
7.08e3
  • 7.08e3
76.28
  • 76.28
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
7.12e3
  • 7.12e3
76.17
  • 76.17
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
7.12e3
  • 7.12e3
76.15
  • 76.15
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
7.15e3
  • 7.15e3
  • 9.30e3
76.08
  • 76.08
  • 68.85
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
7.28e3
  • 7.28e3
75.62
  • 75.62
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
7.29e3
  • 7.29e3
  • 8.73e3
75.60
  • 75.60
  • 70.76
AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
7.34e3
  • 7.34e3
75.44
  • 75.44
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
7.44e3
  • 7.44e3
75.09
  • 75.09
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
7.72e3
  • 7.72e3
74.15
  • 74.15
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
8.29e3
  • 8.29e3
72.25
  • 72.25
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
8.56e3
  • 8.56e3
71.33
  • 71.33
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
8.62e3
  • 8.62e3
  • 1.42e4
71.13
  • 71.13
  • 52.51
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
9.50e3
  • 9.50e3
68.19
  • 68.19
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
9.74e3
  • 9.74e3
67.37
  • 67.37
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
9.83e3
  • 9.83e3
67.07
  • 67.07
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.23e4
  • 1.23e4
58.96
  • 58.96
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Cross-references

EnsemblENSDARG00000063249 (mrpl9)
ZFINZDB-GENE-070717-4 (mrpl9)
EMBLBX927401
Uniprot/SPTREMBLA3KQS0, A3KQS0_DANRE

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