D. rerio Gene: myh9a - ENSDARG00000063295 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000063295
Namemyh9a
Descriptionmyosin, heavy chain 9a, non-muscle [Source:ZFIN;Acc:ZDB-GENE-030131-5870]
OrganismDanio rerio (zebrafish)
Synonym(s)fi22c04, fj85e11, myh9, myh9l2, wu:fi22c04, wu:fj85e11, zgc:162029, zgc:66164, znmhc-iia
Orthologs(s)7 orthologs
Paralog(s)50 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
111
  • 111
  • 462
99.63
  • 99.63
  • 98.46
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
375
  • 375
  • 406
  • 1.02e3
  • 2.52e3
  • 2.69e3
98.75
  • 98.75
  • 98.64
  • 96.59
  • 91.56
  • 91.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
442
  • 442
98.52
  • 98.52
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
525
  • 525
  • 529
  • 598
  • 741
  • 989
  • 1.07e3
  • 1.20e3
  • 1.46e3
  • 1.64e3
  • 4.05e3
98.25
  • 98.25
  • 98.23
  • 98.00
  • 97.52
  • 96.69
  • 96.42
  • 95.98
  • 95.13
  • 94.50
  • 86.43
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
581
  • 581
98.06
  • 98.06
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000036Larval:Day 4
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000024Segmentation:5-9 somites
  • UBERON:0000106zygote stage
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000037Larval:Day 5
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000017Gastrula:50%-epiboly
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
  • ZFS:0000049segmentation
  • UBERON:0000068embryo stage
588
  • 588
  • 646
  • 732
  • 864
  • 1.13e3
  • 1.21e3
  • 1.30e3
  • 1.46e3
  • 1.67e3
  • 1.98e3
  • 2.07e3
  • 2.26e3
  • 2.33e3
  • 6.45e3
  • 6.54e3
  • 6.97e3
  • 7.91e3
  • 1.25e4
  • 1.35e4
  • 1.45e4
  • 1.45e4
98.03
  • 98.03
  • 97.84
  • 97.55
  • 97.11
  • 96.21
  • 95.95
  • 95.65
  • 95.10
  • 94.42
  • 93.36
  • 93.07
  • 92.42
  • 92.20
  • 78.41
  • 78.12
  • 76.66
  • 73.52
  • 58.10
  • 54.83
  • 51.51
  • 51.42
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
599
  • 599
98.00
  • 98.00
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
640
  • 640
97.86
  • 97.86
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
641
  • 641
97.86
  • 97.86
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
806
  • 806
97.30
  • 97.30
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
856
  • 856
  • 1.41e4
97.14
  • 97.14
  • 52.86
AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
939
  • 939
96.86
  • 96.86
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
967
  • 967
  • 1.63e4
96.76
  • 96.76
  • 45.28
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
993
  • 993
96.68
  • 96.68
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.07e3
  • 1.07e3
  • 1.06e4
96.42
  • 96.42
  • 64.44
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
1.10e3
  • 1.10e3
  • 1.55e3
  • 2.78e3
96.31
  • 96.31
  • 94.81
  • 90.70
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.18e3
  • 1.18e3
96.04
  • 96.04
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.63e3
  • 1.63e3
94.54
  • 94.54
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.79e3
  • 1.79e3
94.02
  • 94.02
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000019Gastrula:Shield
1.86e3
  • 1.86e3
  • 2.25e3
  • 2.32e3
  • 2.37e3
  • 3.27e3
  • 4.46e3
93.78
  • 93.78
  • 92.46
  • 92.25
  • 92.07
  • 89.05
  • 85.06
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.94e3
  • 1.94e3
93.50
  • 93.50
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
2.02e3
  • 2.02e3
93.25
  • 93.25
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.10e3
  • 2.10e3
92.97
  • 92.97
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
2.22e3
  • 2.22e3
92.58
  • 92.58
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
2.76e3
  • 2.76e3
90.76
  • 90.76
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
3.14e3
  • 3.14e3
89.48
  • 89.48
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
4.58e3
  • 4.58e3
84.67
  • 84.67
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
4.86e3
  • 4.86e3
83.73
  • 83.73
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
5.50e3
  • 5.50e3
81.58
  • 81.58
AEIR
  • AEIR
UBERON:0002100trunk
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000028Segmentation:26+ somites
7.47e3
  • 7.47e3
  • 1.49e4
75.00
  • 75.00
  • 50.00
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
8.16e3
  • 8.16e3
72.68
  • 72.68
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
  • ZFS:0000035Larval:Protruding-mouth
9.78e3
  • 9.78e3
  • 1.08e4
  • 1.21e4
67.26
  • 67.26
  • 63.71
  • 59.59
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000151pectoral fin
  • ZFS:0000033Hatching:Long-pec
1.03e4
  • 1.03e4
65.61
  • 65.61
AEIR
  • AEIR
UBERON:0007812post-anal tail
  • ZFS:0000029Pharyngula:Prim-5
1.12e4
  • 1.12e4
62.50
  • 62.50
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.21e4
  • 1.21e4
59.59
  • 59.59
AEIR
  • AEIR
UBERON:0003052midbrain-hindbrain boundary
  • ZFS:0000029Pharyngula:Prim-5
1.28e4
  • 1.28e4
57.12
  • 57.12
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
1.29e4
  • 1.29e4
  • 1.50e4
56.65
  • 56.65
  • 49.94
AEIR
  • AEIR
  • AEIR
UBERON:0010312immature eye
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000029Pharyngula:Prim-5
1.33e4
  • 1.33e4
  • 1.34e4
  • 1.35e4
55.53
  • 55.53
  • 55.24
  • 54.73
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002533post-anal tail bud
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000027Segmentation:20-25 somites
1.34e4
  • 1.34e4
  • 1.36e4
55.24
  • 55.24
  • 54.53
AEIR
  • AEIR
  • AEIR
UBERON:0001890forebrain
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000029Pharyngula:Prim-5
1.39e4
  • 1.39e4
  • 1.49e4
  • 1.49e4
53.31
  • 53.31
  • 49.97
  • 49.97
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003055periderm
  • ZFS:0000028Segmentation:26+ somites
1.39e4
  • 1.39e4
53.31
  • 53.31
AEIR
  • AEIR
UBERON:0001003skin epidermis
  • ZFS:0000031Pharyngula:Prim-25
1.40e4
  • 1.40e4
53.10
  • 53.10
AEIR
  • AEIR
UBERON:2001055pronephric duct opening
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
1.49e4
  • 1.49e4
  • 1.49e4
50.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Bilateria7 species7 genesCompare expression

Orthology information comes from OMA : ENSDARG00000063295.

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Chordata3 genesCompare expression
Bilateria5 genesCompare expression
Opisthokonta50 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000063295.

Cross-references

EnsemblENSDARG00000063295 (myh9a)
ZFINZDB-GENE-030131-5870 (myh9a)
Uniprot/SPTREMBLF1R889, F1R889_DANRE, F8W3L6, F8W3L6_DANRE

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