D. rerio Gene: abcb6a - ENSDARG00000063297 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000063297
Nameabcb6a
DescriptionATP-binding cassette, sub-family B (MDR/TAP), member 6a [Source:ZFIN;Acc:ZDB-GENE-050517-9]
OrganismDanio rerio (zebrafish)
Synonym(s)abcb6
Orthologs(s)20 orthologs
Paralog(s)33 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.42e3
  • 1.42e3
95.27
  • 95.27
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.64e3
  • 1.64e3
94.51
  • 94.51
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
2.58e3
  • 2.58e3
  • 2.92e3
91.36
  • 91.36
  • 90.22
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
4.35e3
  • 4.35e3
  • 7.41e3
85.43
  • 85.43
  • 75.20
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
4.53e3
  • 4.53e3
84.84
  • 84.84
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
5.61e3
  • 5.61e3
81.20
  • 81.20
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
6.71e3
  • 6.71e3
77.53
  • 77.53
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
7.01e3
  • 7.01e3
76.52
  • 76.52
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
7.15e3
  • 7.15e3
  • 8.93e3
76.08
  • 76.08
  • 70.12
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
8.52e3
  • 8.52e3
71.47
  • 71.47
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
8.68e3
  • 8.68e3
70.93
  • 70.93
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
8.85e3
  • 8.85e3
  • 2.02e4
70.37
  • 70.37
  • 32.37
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
9.24e3
  • 9.24e3
69.06
  • 69.06
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
9.63e3
  • 9.63e3
67.77
  • 67.77
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
9.76e3
  • 9.76e3
67.32
  • 67.32
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.01e4
  • 1.01e4
66.03
  • 66.03
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.19e4
  • 1.19e4
60.22
  • 60.22
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.20e4
  • 1.20e4
59.91
  • 59.91
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.23e4
  • 1.23e4
58.77
  • 58.77
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
1.26e4
  • 1.26e4
  • 1.29e4
  • 1.33e4
  • 1.64e4
  • 1.84e4
57.67
  • 57.67
  • 56.69
  • 55.61
  • 45.25
  • 38.39
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.31e4
  • 1.31e4
56.10
  • 56.10
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.39e4
  • 1.39e4
53.31
  • 53.31
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.65e4
  • 1.65e4
  • 1.83e4
44.86
  • 44.86
  • 38.73
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.79e4
  • 1.79e4
39.96
  • 39.96
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi15 species15 genesCompare expression
Bilateria20 species20 genesCompare expression

Orthology information comes from OMA : ENSDARG00000063297.

Paralogs (same species)

Cross-references

EnsemblENSDARG00000063297 (abcb6a)
ZFINZDB-GENE-050517-9 (abcb6a)
EMBLBX004814
Uniprot/SPTREMBLF1QCK2, F1QCK2_DANRE

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