D. rerio Gene: mgat4a - ENSDARG00000063330 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000063330
Namemgat4a
Descriptionmannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A [Source:ZFIN;Acc:ZDB-GENE-070912-27]
OrganismDanio rerio (zebrafish)
Synonym(s)si:ch211-121j5.1
Orthologs(s)25 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.71e3
  • 1.71e3
  • 4.45e3
94.27
  • 94.27
  • 85.10
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
3.24e3
  • 3.24e3
89.16
  • 89.16
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
4.03e3
  • 4.03e3
86.52
  • 86.52
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
4.42e3
  • 4.42e3
85.21
  • 85.21
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
4.51e3
  • 4.51e3
  • 4.95e3
84.91
  • 84.91
  • 83.44
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
5.20e3
  • 5.20e3
82.60
  • 82.60
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
5.33e3
  • 5.33e3
82.17
  • 82.17
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
7.20e3
  • 7.20e3
75.89
  • 75.89
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
7.26e3
  • 7.26e3
  • 7.32e3
75.70
  • 75.70
  • 75.50
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
7.89e3
  • 7.89e3
73.59
  • 73.59
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
7.97e3
  • 7.97e3
73.33
  • 73.33
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
8.06e3
  • 8.06e3
  • 8.52e3
  • 9.22e3
  • 1.05e4
  • 1.08e4
73.02
  • 73.02
  • 71.48
  • 69.13
  • 64.79
  • 64.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
8.28e3
  • 8.28e3
72.28
  • 72.28
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
8.71e3
  • 8.71e3
70.83
  • 70.83
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
8.74e3
  • 8.74e3
70.75
  • 70.75
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
9.71e3
  • 9.71e3
  • 1.16e4
67.47
  • 67.47
  • 61.28
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
1.02e4
  • 1.02e4
  • 1.33e4
65.88
  • 65.88
  • 55.31
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.05e4
  • 1.05e4
64.93
  • 64.93
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.13e4
  • 1.13e4
62.25
  • 62.25
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.15e4
  • 1.15e4
61.46
  • 61.46
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.18e4
  • 1.18e4
60.36
  • 60.36
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.22e4
  • 1.22e4
59.03
  • 59.03
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.25e4
  • 1.25e4
58.15
  • 58.15
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.36e4
  • 1.36e4
54.62
  • 54.62
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi19 species19 genesCompare expression
Bilateria25 species25 genesCompare expression

Orthology information comes from OMA : ENSDARG00000063330.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Bilateria2 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000063330.

Cross-references

EnsemblENSDARG00000063330 (mgat4a)
ZFINZDB-GENE-070912-27 (mgat4a)
EMBLAL772133
Uniprot/SPTREMBLB0R014, B0R014_DANRE, E9QGN4, E9QGN4_DANRE

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