D. rerio Gene: si:ch211-1e14.1 - ENSDARG00000063361 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000063361
Namesi:ch211-1e14.1
Descriptionsi:ch211-1e14.1 [Source:ZFIN;Acc:ZDB-GENE-050420-149]
OrganismDanio rerio (zebrafish)
Orthologs(s)1 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
3.90e3
  • 3.90e3
86.95
  • 86.95
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
7.50e3
  • 7.50e3
74.89
  • 74.89
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
9.04e3
  • 9.04e3
69.73
  • 69.73
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
1.02e4
  • 1.02e4
  • 1.35e4
65.95
  • 65.95
  • 54.84
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.24e4
  • 1.24e4
  • 1.26e4
58.36
  • 58.36
  • 57.90
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
1.28e4
  • 1.28e4
  • 1.71e4
  • 1.81e4
  • 1.86e4
  • 2.03e4
57.20
  • 57.20
  • 42.90
  • 39.46
  • 37.58
  • 32.16
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.59e4
  • 1.59e4
46.60
  • 46.60
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.68e4
  • 1.68e4
43.88
  • 43.88
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
1.69e4
  • 1.69e4
43.31
  • 43.31
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.82e4
  • 1.82e4
  • 2.11e4
39.19
  • 39.19
  • 29.21
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.84e4
  • 1.84e4
38.38
  • 38.38
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.87e4
  • 1.87e4
  • 2.22e4
37.28
  • 37.28
  • 25.53
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.98e4
  • 1.98e4
33.54
  • 33.54
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.13e4
  • 2.13e4
28.74
  • 28.74
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.13e4
  • 2.13e4
28.67
  • 28.67
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.23e4
  • 2.23e4
25.37
  • 25.37
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi1 species1 geneCompare expression

Orthology information comes from OMA : ENSDARG00000063361.

Cross-references

EnsemblENSDARG00000063361 (si:ch211-1e14.1)
ZFINZDB-GENE-050420-149 (si:ch211-1e14.1)
EMBLAL929229, BX005474
Uniprot/SPTREMBLF1QMT4, F1QMT4_DANRE, Q1LY95, Q1LY95_DANRE

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