D. rerio Gene: rasa3 - ENSDARG00000063371 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000063371
Namerasa3
DescriptionRAS p21 protein activator 3 [Source:ZFIN;Acc:ZDB-GENE-090313-21]
OrganismDanio rerio (zebrafish)
Synonym(s)si:ch211-129c2.7
Orthologs(s)22 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000468multi-cellular organism
  • ZFS:0000029Pharyngula:Prim-5
1.54e3
  • 1.54e3
94.85
  • 94.85
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
3.92e3
  • 3.92e3
86.89
  • 86.89
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
4.87e3
  • 4.87e3
  • 9.12e3
83.70
  • 83.70
  • 69.47
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
5.20e3
  • 5.20e3
82.60
  • 82.60
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
5.92e3
  • 5.92e3
80.17
  • 80.17
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
6.00e3
  • 6.00e3
79.92
  • 79.92
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
6.33e3
  • 6.33e3
78.81
  • 78.81
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
7.02e3
  • 7.02e3
  • 9.50e3
  • 9.62e3
  • 1.07e4
  • 1.27e4
76.49
  • 76.49
  • 68.18
  • 67.78
  • 64.05
  • 57.42
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
8.26e3
  • 8.26e3
  • 8.46e3
72.33
  • 72.33
  • 71.68
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
8.81e3
  • 8.81e3
70.51
  • 70.51
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
1.00e4
  • 1.00e4
  • 1.17e4
66.49
  • 66.49
  • 60.80
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.02e4
  • 1.02e4
65.88
  • 65.88
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.05e4
  • 1.05e4
64.82
  • 64.82
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.06e4
  • 1.06e4
64.38
  • 64.38
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.12e4
  • 1.12e4
62.37
  • 62.37
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.18e4
  • 1.18e4
60.58
  • 60.58
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.24e4
  • 1.24e4
  • 1.31e4
58.51
  • 58.51
  • 56.26
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.27e4
  • 1.27e4
57.44
  • 57.44
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.28e4
  • 1.28e4
57.10
  • 57.10
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.31e4
  • 1.31e4
56.05
  • 56.05
AEIR
  • AEIR
UBERON:0001017central nervous system
  • ZFS:0000029Pharyngula:Prim-5
1.34e4
  • 1.34e4
55.24
  • 55.24
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.53e4
  • 1.53e4
48.75
  • 48.75
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
1.62e4
  • 1.62e4
  • 1.69e4
45.61
  • 45.61
  • 43.39
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.71e4
  • 1.71e4
42.70
  • 42.70
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.73e4
  • 1.73e4
42.09
  • 42.09
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.10e4
  • 2.10e4
29.70
  • 29.70
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi16 species16 genesCompare expression
Bilateria22 species22 genesCompare expression

Orthology information comes from OMA : ENSDARG00000063371.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression

Paralogy information comes from OMA : ENSDARG00000063371.

Cross-references

EnsemblENSDARG00000063371 (rasa3)
ZFINZDB-GENE-090313-21 (rasa3)
EMBLCU179747, FP236172
Uniprot/SPTREMBLE7F916, E7F916_DANRE

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