D. rerio Gene: cers1 - ENSDARG00000063412 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000063412
Namecers1
Descriptionceramide synthase 1 [Source:ZFIN;Acc:ZDB-GENE-050208-406]
OrganismDanio rerio (zebrafish)
Synonym(s)si:dkey-49m19.7, wu:fb75h07
Orthologs(s)15 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
3.72e3
  • 3.72e3
  • 8.86e3
  • 1.09e4
  • 1.18e4
87.55
  • 87.55
  • 70.35
  • 63.39
  • 60.63
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
3.93e3
  • 3.93e3
86.84
  • 86.84
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
5.59e3
  • 5.59e3
  • 1.19e4
  • 1.22e4
  • 1.45e4
81.30
  • 81.30
  • 59.99
  • 59.08
  • 51.49
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
5.77e3
  • 5.77e3
80.70
  • 80.70
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
6.13e3
  • 6.13e3
79.49
  • 79.49
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
6.24e3
  • 6.24e3
79.12
  • 79.12
AEIR
  • AEIR
UBERON:0002108small intestine
  • ZFS:0000037Larval:Day 5
7.47e3
  • 7.47e3
75.00
  • 75.00
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
7.64e3
  • 7.64e3
  • 1.36e4
74.40
  • 74.40
  • 54.39
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
8.49e3
  • 8.49e3
71.57
  • 71.57
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
8.93e3
  • 8.93e3
70.11
  • 70.11
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
9.30e3
  • 9.30e3
68.86
  • 68.86
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0004707pharyngula stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
1.08e4
  • 1.08e4
  • 1.11e4
  • 1.23e4
  • 1.55e4
  • 1.58e4
  • 1.65e4
  • 1.77e4
  • 1.78e4
  • 1.78e4
63.97
  • 63.97
  • 62.95
  • 58.75
  • 47.94
  • 47.02
  • 44.70
  • 40.76
  • 40.40
  • 40.27
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000036Larval:Day 4
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
1.17e4
  • 1.17e4
  • 1.38e4
  • 1.58e4
  • 1.62e4
  • 1.71e4
  • 1.74e4
  • 1.77e4
  • 1.78e4
  • 1.78e4
  • 1.80e4
60.72
  • 60.72
  • 53.94
  • 47.25
  • 45.89
  • 42.89
  • 41.67
  • 40.59
  • 40.40
  • 40.38
  • 39.85
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000247Rohon-Beard neuron
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
1.19e4
  • 1.19e4
  • 1.31e4
60.00
  • 60.00
  • 56.24
AEIR
  • AEIR
  • AEIR
UBERON:2001076intestinal bulb
  • ZFS:0000037Larval:Day 5
1.19e4
  • 1.19e4
59.99
  • 59.99
AEIR
  • AEIR
UBERON:0000151pectoral fin
  • ZFS:0000033Hatching:Long-pec
1.21e4
  • 1.21e4
59.36
  • 59.36
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.27e4
  • 1.27e4
57.57
  • 57.57
AEIR
  • AEIR
UBERON:2000033intermediate cell mass of mesoderm
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
1.34e4
  • 1.34e4
  • 1.49e4
55.24
  • 55.24
  • 49.99
AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
1.37e4
  • 1.37e4
  • 1.37e4
54.22
  • 54.22
  • 53.99
AEIR
  • AEIR
  • AEIR
UBERON:0001675trigeminal ganglion
  • ZFS:0000029Pharyngula:Prim-5
1.37e4
  • 1.37e4
54.15
  • 54.15
AEIR
  • AEIR
UBERON:0003051ear vesicle
  • ZFS:0000037Larval:Day 5
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0005563trigeminal neural crest
  • ZFS:0000026Segmentation:14-19 somites
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
1.51e4
  • 1.51e4
  • 1.53e4
  • 1.56e4
49.60
  • 49.60
  • 48.92
  • 47.74
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.53e4
  • 1.53e4
48.64
  • 48.64
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.59e4
  • 1.59e4
46.70
  • 46.70
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.65e4
  • 1.65e4
44.73
  • 44.73
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.66e4
  • 1.66e4
44.32
  • 44.32
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.71e4
  • 1.71e4
42.67
  • 42.67
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.78e4
  • 1.78e4
40.34
  • 40.34
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.81e4
  • 1.81e4
39.54
  • 39.54
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi14 species14 genesCompare expression
Bilateria15 species15 genesCompare expression

Orthology information comes from OMA : ENSDARG00000063412.

Cross-references

EnsemblENSDARG00000063412 (cers1)
ZFINZDB-GENE-050208-406 (cers1)
EMBLBX649252
Uniprot/SPTREMBLF1Q5B1, F1Q5B1_DANRE

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