D. rerio Gene: ccdc13 - ENSDARG00000063451 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000063451
Nameccdc13
Descriptioncoiled-coil domain containing 13 [Source:ZFIN;Acc:ZDB-GENE-061207-11]
OrganismDanio rerio (zebrafish)
Synonym(s)si:ch211-163f10.5
Orthologs(s)17 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000066fully formed stage
2.15e3
  • 2.15e3
92.80
  • 92.80
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.35e4
  • 1.35e4
54.90
  • 54.90
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.39e4
  • 1.39e4
53.30
  • 53.30
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.52e4
  • 1.52e4
48.94
  • 48.94
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.59e4
  • 1.59e4
46.76
  • 46.76
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.74e4
  • 1.74e4
41.69
  • 41.69
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.80e4
  • 1.80e4
39.76
  • 39.76
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.88e4
  • 1.88e4
37.18
  • 37.18
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
1.90e4
  • 1.90e4
  • 1.97e4
  • 2.16e4
36.34
  • 36.34
  • 33.94
  • 27.82
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.95e4
  • 1.95e4
34.69
  • 34.69
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
2.11e4
  • 2.11e4
29.48
  • 29.48
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.11e4
  • 2.11e4
29.35
  • 29.35
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
2.29e4
  • 2.29e4
23.40
  • 23.40
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Cross-references

EnsemblENSDARG00000063451 (ccdc13)
ZFINZDB-GENE-061207-11 (ccdc13)
EMBLCU929426
Uniprot/SPTREMBLF1RBY8, F1RBY8_DANRE, F8W3F2, F8W3F2_DANRE

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